RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 KAT2AQ92830 837 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 MUC13Q9H3R2 512 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 SLC16A5O15375 505 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF217O75362 1048 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 REM1O75628 298 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 GSTM5P46439 218 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 CHN2P52757 468 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 PPP1R8Q12972 351 aaKnown RBP12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 HERC3Q15034 1050 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 NOXRED1Q6NXP6 359 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 GPR149Q86SP6 731 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 AMIGO1Q86WK6 493 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 PEX5LQ8IYB4 626 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.69□□□□□ -0.387e-6■■■■□ 20.7
PTPRN2-202ENST00000389416 ACVR1CQ8NER5 493 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 ADCY4Q8NFM4 1077 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 EBF2Q9HAK2 575 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 RTCAO00442 366 aaKnown RBP12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 PDYNP01213 254 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 AOC1P19801 751 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 OXTRP30559 389 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 HOXA9P31269 272 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 CSTF2P33240 577 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■■■□ 22
PTPRN2-202ENST00000389416 CTSKP43235 329 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 PTSQ03393 145 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 PTCRAQ6ISU1 281 aaPredicted RBP12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF544Q6NX49 715 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 RFLNAQ6ZTI6 216 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 DEPDC4Q8N2C3 294 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 NELL2Q99435 816 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 CLEC4EQ9ULY5 219 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 GPR34Q9UPC5 381 aa12.69□□□□□ -0.38
PTPRN2-202ENST00000389416 PRSS51A0A1B0GVH4 220 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TP73O15350 636 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 CD247P20963 164 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 SH3BP2P78314 561 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 DEFB134Q4QY38 66 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 DPPA4Q7L190 304 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TREML1Q86YW5 311 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TOE1Q96GM8 510 aaKnown RBP12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 CALML5Q9NZT1 146 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 OR5K4A6NMS3 321 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 C2orf74A8MZ97 194 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 PEX2P28328 305 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 GSK3BP49841 420 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF763Q0D2J5 394 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ABRAXAS2Q15018 415 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ARHGAP40Q5TG30 622 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 LIPJQ5W064 366 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 DUS1LQ6P1R4 473 aaKnown RBP12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 SFRP1Q8N474 314 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 OR10Q1Q8NGQ4 319 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 CANT1Q8WVQ1 401 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 PIH1D2Q8WWB5 315 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 MVB12BQ9H7P6 319 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TPT1P8Q9HAU6 139 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 KLHL1Q9NR64 748 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 SPATA7Q9P0W8 599 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 SCML1Q9UN30 329 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 LOC100506127A0A0U1RQW1 187 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 FEZF1A0PJY2 475 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TSPAN19P0C672 248 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ST13P50502 369 aaKnown RBP12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 CRISP3P54108 245 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 GPR68Q15743 365 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 IFI44LQ53G44 452 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 PARM1Q6UWI2 310 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ZNF534Q76KX8 674 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 HIPK1Q86Z02 1210 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ARL10Q8N8L6 244 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TSPAN14Q8NG11 270 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 OR5AR1Q8NGP9 310 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 SLC38A4Q969I6 547 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 AURKBQ96GD4 344 aaPredicted RBP12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 TGM7Q96PF1 710 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 F2RL3Q96RI0 385 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 DNAJC15Q9Y5T4 150 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 IGLV3-10A0A075B6K4 115 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 UBXN7O94888 489 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 OR6B1O95007 311 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 IGFBP5P24593 272 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 DCST1Q5T197 706 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 GALNT18Q6P9A2 607 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 SIX5Q8N196 739 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 CENPNQ96H22 339 aaPredicted RBP12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 C5orf34Q96MH7 638 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 IGSF5Q9NSI5 407 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 ATXN10Q9UBB4 475 aa12.68□□□□□ -0.38
PTPRN2-202ENST00000389416 MAOBP27338 520 aa12.67□□□□□ -0.38
PTPRN2-202ENST00000389416 KHKP50053 298 aa12.67□□□□□ -0.38
PTPRN2-202ENST00000389416 HTR6P50406 440 aa12.67□□□□□ -0.38
PTPRN2-202ENST00000389416 DLG1Q12959 904 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms