RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 E2F3O00716 465 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 B4GALT2O60909 372 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 NUDT14O95848 222 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 HOXB3P14651 431 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 SLC7A9P82251 487 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ERV3-1Q14264 604 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 LASP1Q14847 261 aaKnown RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 HNRNPA1L2Q32P51 320 aaKnown RBP7.84□□□□□ -1.15
CKAP2-203ENST00000378037 GPR33Q49SQ1 333 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 MED27Q6P2C8 311 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 OOSP2Q86WS3 158 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 P3H2Q8IVL5 708 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 FUNDC1Q8IVP5 155 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 FAM86B1Q8N7N1 296 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ACTRT2Q8TDY3 377 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ZSCAN5AQ9BUG6 496 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 PRR14Q9BWN1 585 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 ACPTQ9BZG2 426 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 FOXQ1Q9C009 403 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 IMPAD1Q9NX62 359 aa7.84□□□□□ -1.15
CKAP2-203ENST00000378037 BPTFQ12830 3046 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 EDDM13A0A1B0GTR0 161 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 WASH4PA8MWX3 477 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CLIC1O00299 241 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 BTN3A3O00478 584 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SLC28A2O43868 658 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SNAP29O95721 258 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ACPPP15309 386 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 RGS19P49795 217 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MLLT10P55197 1068 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CDH12P55289 794 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 B4GALNT1Q00973 533 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF33AQ06730 810 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 C16orf72Q14CZ0 275 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 USP39Q53GS9 565 aaKnown RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 TMIGD1Q6UXZ0 262 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 GATAD2AQ86YP4 633 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 DTWD1Q8N5C7 304 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 OR2T34Q8NGX1 318 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 OR2T3Q8NH03 318 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 RAD51AP1Q96B01 352 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 AHCYL2Q96HN2 611 aaKnown RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ASB16Q96NS5 453 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 GAS2L1Q99501 681 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 QRSL1Q9H0R6 528 aaKnown RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM168Q9H0V1 697 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ABCG4Q9H172 646 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SRMSQ9H3Y6 488 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CMTM6Q9NX76 183 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF225Q9UK10 706 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SUFUQ9UMX1 484 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 HEMK1Q9Y5R4 338 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 IRAK3Q9Y616 596 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ALPK3Q96L96 1907 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MUC6Q6W4X9 2439 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SLC35F4A4IF30 521 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 RNGTTO60942 597 aaKnown RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF189O75820 626 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CH25HO95992 272 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 EGFP01133 1207 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CFIP05156 583 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 LYNP07948 512 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ETFAP13804 333 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ATP6V1C1P21283 382 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CDH3P22223 829 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 IL12AP29459 219 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CDKN2CP42773 168 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CENPAP49450 140 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SIM1P81133 766 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 HPCAP84074 193 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MLLT1Q03111 559 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 AASDHQ4L235 1098 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CLEC12AQ5QGZ9 265 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 GPR107Q5VW38 600 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 NOXRED1Q6NXP6 359 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 LRRTM4Q86VH4 590 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CLIP4Q8N3C7 705 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 DHRSXQ8N5I4 330 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 GATSQ8NAP1 163 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ATP6V1C2Q8NEY4 427 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF480Q8WV37 535 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 LZICQ8WZA0 190 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 TRMT2BQ96GJ1 504 aaKnown RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 DPH7Q9BTV6 452 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 DUSP26Q9BV47 211 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CNPPD1Q9BV87 410 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 BTBD1Q9H0C5 482 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 TPK1Q9H3S4 243 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SFXN1Q9H9B4 322 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CDH7Q9ULB5 785 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MED16Q9Y2X0 877 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 REV3LO60673 3130 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 CCDC88CQ9P219 2028 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 ELOVL7A1L3X0 281 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 M0QX08 132 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 OR7A17O14581 309 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 KIAA0355O15063 1070 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 MITFO75030 526 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-203ENST00000378037 SOCS5O75159 536 aa7.83□□□□□ -1.16
CKAP2-203ENST00000378037 DCNP07585 359 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms