RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SH2D4BQ5SQS7 431 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 KANK2Q63ZY3 851 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 FAM47EQ6ZV65 393 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 RNF44Q7L0R7 432 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 KLHL6Q8WZ60 621 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 C7orf26Q96N11 449 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 FCRL4Q96PJ5 515 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ZNF768Q9H5H4 540 aaKnown RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ZNF490Q9ULM2 529 aaPredicted RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 A8MU76 341 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 FFAR3O14843 346 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 TOX3O15405 576 aaPredicted RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 GPR42O15529 346 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ZBTB11O95625 1053 aaPredicted RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ENO1P06733 434 aaKnown RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 FTH1P19P0C7X4 201 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 HGFP14210 728 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 EZRP15311 586 aaKnown RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 BCL6P41182 706 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 NAA25Q14CX7 972 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 CPSF6Q16630 551 aaKnown RBP eCLIP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 CDCP2Q5VXM1 449 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ARHGAP22Q7Z5H3 698 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ANKRD53Q8N9V6 530 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 SLC41A2Q96JW4 573 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 AIF1LQ9BQI0 150 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 SARGQ9BW04 601 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 CDV3Q9UKY7 258 aaKnown RBP20.42■□□□□ 0.86
CBWD3-202ENST00000377342 BTRCQ9Y297 605 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 TIMM22Q9Y584 194 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 TRBC2A0A5B9 178 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 H0YIV9 168 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 SNUPNO95149 360 aaKnown RBP20.41■□□□□ 0.86
CBWD3-202ENST00000377342 GABRA4P48169 554 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 SEPHS1P49903 392 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 HTR6P50406 440 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 E2F1Q01094 437 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 ZFP36L1Q07352 338 aaKnown RBP20.41■□□□□ 0.86
CBWD3-202ENST00000377342 ZRSR2Q15696 482 aaKnown RBP20.41■□□□□ 0.86
CBWD3-202ENST00000377342 PAGE2BQ5JRK9 111 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 VN1R5Q7Z5H4 357 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.41■□□□□ 0.86
CBWD3-202ENST00000377342 RCBTB1Q8NDN9 531 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 ZNF317Q96PQ6 595 aaPredicted RBP20.41■□□□□ 0.86
CBWD3-202ENST00000377342 SLC29A3Q9BZD2 475 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 PNPOQ9NVS9 261 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 SPTBP11277 2137 aa20.41■□□□□ 0.86
CBWD3-202ENST00000377342 AZIN1O14977 448 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 LCMT2O60294 686 aaKnown RBP20.4■□□□□ 0.86
CBWD3-202ENST00000377342 FGF4P08620 206 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 SIM1P81133 766 aaPredicted RBP20.4■□□□□ 0.86
CBWD3-202ENST00000377342 CYP4F3Q08477 520 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 DEFB110Q30KQ9 67 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 UGT3A2Q3SY77 523 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 FBXO42Q6P3S6 717 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 DHRS13Q6UX07 377 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 TMIGD1Q6UXZ0 262 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 RBM44Q6ZP01 1051 aaKnown RBP20.4■□□□□ 0.86
CBWD3-202ENST00000377342 LAS2Q8IYD9 372 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 OR7G3Q8NG95 312 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 WDR20Q8TBZ3 569 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 CHRNA10Q9GZZ6 450 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 ILKAPQ9H0C8 392 aaPredicted RBP20.4■□□□□ 0.86
CBWD3-202ENST00000377342 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.4■□□□□ 0.86
CBWD3-202ENST00000377342 FIS1Q9Y3D6 152 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 PCDHGA4Q9Y5G9 962 aa20.4■□□□□ 0.86
CBWD3-202ENST00000377342 PTPRBP23467 1997 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 EDF1O60869 148 aaKnown RBP20.39■□□□□ 0.86
CBWD3-202ENST00000377342 CEACAM1P13688 526 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 NELFEP18615 380 aaKnown RBP20.39■□□□□ 0.86
CBWD3-202ENST00000377342 SERPINB3P29508 390 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 LSP1P33241 339 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 SCTRP47872 440 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 NOVA1P51513 510 aaKnown RBP20.39■□□□□ 0.86
CBWD3-202ENST00000377342 RELAQ04206 551 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 LAPTM5Q13571 262 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 KCNAB1Q14722 419 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 MED27Q6P2C8 311 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 KMT5CQ86Y97 462 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 DNAJC22Q8N4W6 341 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 METTL6Q8TCB7 284 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 TCTN2Q96GX1 697 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 MAGEB10Q96LZ2 347 aaPredicted RBP20.39■□□□□ 0.86
CBWD3-202ENST00000377342 OR2A5Q96R48 311 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 NT5DC2Q9H857 520 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 FARSBQ9NSD9 589 aaKnown RBP20.39■□□□□ 0.86
CBWD3-202ENST00000377342 SOHLH2Q9NX45 425 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 MARCOQ9UEW3 520 aaPredicted RBP20.39■□□□□ 0.86
CBWD3-202ENST00000377342 TRAF6Q9Y4K3 522 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 DNAJC15Q9Y5T4 150 aa20.39■□□□□ 0.86
CBWD3-202ENST00000377342 JUNP05412 331 aaKnown RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 UROSP10746 265 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 CXCR2P25025 360 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 MLLT3P42568 568 aaPredicted RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 GNGT1P63211 74 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 HSD11B2P80365 405 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 C16orf72Q14CZ0 275 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 RSPO4Q2I0M5 234 aaPredicted RBP20.38■□□□□ 0.85
CBWD3-202ENST00000377342 PHF19Q5T6S3 580 aa20.38■□□□□ 0.85
CBWD3-202ENST00000377342 FRMPD2BQ6IN97 320 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms