RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TMEM233B4DJY2 109 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 TAF4O00268 1085 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 XKP51811 444 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 DGKQP52824 942 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 SYVN1Q86TM6 617 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 OR10T2Q8NGX3 314 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 WDR92Q96MX6 357 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 GPN1Q9HCN4 374 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 PCDHGB7Q9Y5F8 929 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 C10orf71Q711Q0 1435 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 GRXCR1A8MXD5 290 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 TRIM3O75382 744 aaPredicted RBP13.24□□□□□ -0.29
GPC6-201ENST00000377047 IL33O95760 270 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 FHP07954 510 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 ETS2P15036 469 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 GRIA2P42262 883 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 PON2Q15165 354 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 SLC5A9Q2M3M2 681 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 OR5K1Q8NHB7 308 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 TLCD1Q96CP7 247 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 HERC2P3Q9BVR0 1158 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 STYXL1Q9Y6J8 313 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 KAT7O95251 611 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 PAX7P23759 505 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 BMPR1AP36894 532 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 PER3P56645 1201 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 ZNF783Q6ZMS7 281 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 OR10G2Q8NGC3 310 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 UFD1Q92890 307 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 LGR4Q9BXB1 951 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 OR8D2Q9GZM6 311 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 DNAJB9Q9UBS3 223 aa13.24□□□□□ -0.29
GPC6-201ENST00000377047 BEST1O76090 585 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TXNL4AP83876 142 aaKnown RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 BNIP1Q12981 228 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 ASTE1Q2TB18 679 aaPredicted RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 RAB7BQ96AH8 199 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 CEACAM20Q6UY09 585 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 DPY19L3Q6ZPD9 716 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 CAPSLQ8WWF8 208 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 DHRS1Q96LJ7 313 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TGM7Q96PF1 710 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TRPV5Q9NQA5 729 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 VSTM5A8MXK1 200 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TGM5O43548 720 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 AKAP8O43823 692 aaKnown RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 TIMP1P01033 207 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 MAGP20916 626 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 MATN1P21941 496 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TXNDC5Q8NBS9 432 aaKnown RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 TRPV1Q8NER1 839 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 SCAMP4Q969E2 229 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 RIMKLBQ9ULI2 386 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 OR6C74A6NCV1 312 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 GLOD5A6NK44 160 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 GSRP00390 522 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 GP1BBP13224 206 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 VBP1P61758 197 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 ADGRE1Q14246 886 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 DHCR24Q15392 516 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 OR2L3Q8NG85 312 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 IGSF8Q969P0 613 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 PKP4Q99569 1192 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 CD244Q9BZW8 370 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 MRM3Q9HC36 420 aaKnown RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 ZDHHC2Q9UIJ5 367 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 MUSKO15146 869 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TSPAN6O43657 245 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 JUNDP17535 347 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 VIPR2P41587 438 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 PIK3CBP42338 1070 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 TSPAN5P62079 268 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 PQLC3Q8N755 202 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 NECTIN4Q96NY8 510 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 MGME1Q9BQP7 344 aa13.23□□□□□ -0.29
GPC6-201ENST00000377047 SPIN1Q9Y657 262 aaPredicted RBP13.23□□□□□ -0.29
GPC6-201ENST00000377047 ZNF840PA6NDX5 716 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 SLC22A2O15244 555 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 DLX3O60479 287 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 CDC123O75794 336 aaPredicted RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 SNX4O95219 450 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 HOXD13P35453 343 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 OR56A1Q8NGH5 318 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 NSUN3Q9H649 340 aaKnown RBP13.22□□□□□ -0.29
GPC6-201ENST00000377047 FTSJ1Q9UET6 329 aa13.22□□□□□ -0.29
GPC6-201ENST00000377047 H7BY64 318 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms