RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 ARHGEF39Q8N4T4 335 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 FDCSPQ8NFU4 85 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 OR56A3Q8NH54 315 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 IP6K3Q96PC2 410 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 OR4K3Q96R72 315 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 SPSB2Q99619 263 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 RBBP8Q99708 897 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 CPNE1Q99829 537 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 UNKQ9C0B0 810 aaKnown RBP13.58□□□□□ -0.24
CLCN6-203ENST00000376490 WDR54Q9H977 334 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 GPAMQ9HCL2 828 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 MLXIPLQ9NP71 852 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 ZDHHC18Q9NUE0 388 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 P4HTMQ9NXG6 502 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 TXNDC16Q9P2K2 825 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 NOVA2Q9UNW9 492 aaKnown RBP13.58□□□□□ -0.24
CLCN6-203ENST00000376490 KCNE1BA0A087WTH5 132 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 A0A0A6YYC8 382 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 I3L1I5 382 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 TXNDC9O14530 226 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 FOXS1O43638 330 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 CEACAM4O75871 244 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 MMP11P24347 488 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 GP5P40197 560 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 RRADP55042 308 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 POU4F1Q01851 419 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 MEF2AQ02078 507 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 OCA2Q04671 838 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 KLRB1Q12918 225 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 USP10Q14694 798 aaKnown RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 TSNQ15631 228 aaKnown RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 PPP1R3AQ16821 1122 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 KBTBD12Q3ZCT8 623 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 VWA2Q5GFL6 755 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 PRSS58Q8IYP2 241 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 MMGT1Q8N4V1 131 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 NOA1Q8NC60 698 aaKnown RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 STT3BQ8TCJ2 826 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 FBF1Q8TES7 1133 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 ATL1Q8WXF7 558 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 ANKRD7Q92527 254 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 HAUS8Q9BT25 410 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 NUDT9Q9BW91 350 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 YIPF2Q9BWQ6 316 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 PHACTR1Q9C0D0 580 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 POPDC3Q9HBV1 291 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 CTNNAL1Q9UBT7 734 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 ZNF282Q9UDV7 671 aaPredicted RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 DMGDHQ9UI17 866 aaKnown RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 ANAPC2Q9UJX6 822 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 CDC14AQ9UNH5 594 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 MRPS2Q9Y399 296 aaKnown RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 PCDHGA9Q9Y5G4 932 aaKnown RBP13.57□□□□□ -0.24
CLCN6-203ENST00000376490 BSNQ9UPA5 3926 aa13.57□□□□□ -0.24
CLCN6-203ENST00000376490 AGPSO00116 658 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 SOCS6O14544 535 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 PHGDHO43175 533 aaKnown RBP13.56□□□□□ -0.24
CLCN6-203ENST00000376490 WISP3O95389 354 aaPredicted RBP13.56□□□□□ -0.24
CLCN6-203ENST00000376490 ZGLP1P0C6A0 271 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 CCDC166P0CW27 439 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 FBLP22087 321 aaKnown RBP13.56□□□□□ -0.24
CLCN6-203ENST00000376490 SLC26A3P40879 764 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 BCL6P41182 706 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 PGDP52209 483 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
CLCN6-203ENST00000376490 TLE1Q04724 770 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 KLC1Q07866 573 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 RAPSNQ13702 412 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 C18orf21Q32NC0 220 aaPredicted RBP13.56□□□□□ -0.24
CLCN6-203ENST00000376490 DCAF10Q5QP82 559 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 CATSPEREQ5SY80 951 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 GRTP1Q5TC63 336 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 GARNL3Q5VVW2 1013 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 AMER3Q8N944 861 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 TEX19Q8NA77 164 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 OR4K1Q8NGD4 311 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 MIEF2Q96C03 454 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 TM4SF19Q96DZ7 209 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 FER1L6-AS2Q96M78 137 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 GPR22Q99680 433 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 MESP1Q9BRJ9 268 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 TRPC4Q9UBN4 977 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 NXT1Q9UKK6 140 aaKnown RBP13.56□□□□□ -0.24
CLCN6-203ENST00000376490 HS3ST3B1Q9Y662 390 aa13.56□□□□□ -0.24
CLCN6-203ENST00000376490 ALOX12BO75342 701 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 ANXA5P08758 320 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 STMN1P16949 149 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 SPRP35270 261 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-203ENST00000376490 GMPRP36959 345 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 CASRP41180 1078 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 CCR8P51685 355 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 ILF2Q12905 390 aaKnown RBP13.55□□□□□ -0.24
CLCN6-203ENST00000376490 FAM53BQ14153 422 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms