RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PLEKHB1Q9UF11 243 aaPredicted RBP13.52□□□□□ -0.25
NELFE-201ENST00000375425 ASIC3Q9UHC3 531 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 ADAMTS6Q9UKP5 1117 aa13.52□□□□□ -0.25
NELFE-201ENST00000375425 NSG1A0A0A6YYJ2 146 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 TTC4O95801 387 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 STATHP02808 62 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 COX6A1P12074 109 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 HRH2P25021 359 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 CXCR2P25025 360 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 RGS4P49798 205 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 SNRPNP63162 240 aaKnown RBP13.51□□□□□ -0.25
NELFE-201ENST00000375425 SYT16Q17RD7 645 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 HIST2H2BCQ6DN03 193 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 LRRC8EQ6NSJ5 796 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 PAQR3Q6TCH7 311 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 IGDCC3Q8IVU1 814 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 KBTBD2Q8IY47 623 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 CATSPER1Q8NEC5 780 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
NELFE-201ENST00000375425 ATG10Q9H0Y0 220 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 PARVBQ9HBI1 364 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 CCDC177Q9NQR7 707 aaPredicted RBP13.51□□□□□ -0.25
NELFE-201ENST00000375425 AGPAT4Q9NRZ5 378 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 C14orf105Q9NVL8 296 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 PDE10AQ9Y233 779 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 ICE1Q9Y2F5 2266 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 CNTRLQ7Z7A1 2325 aa13.51□□□□□ -0.25
NELFE-201ENST00000375425 SPTBN1Q01082 2364 aaKnown RBP13.51□□□□□ -0.25
NELFE-201ENST00000375425 KCNE1BA0A087WTH5 132 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 C8GP07360 202 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 PRR35P0CG20 571 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 CDKN2DP55273 166 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 TBPL1P62380 186 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 MAT1AQ00266 395 aaKnown RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 CDC16Q13042 620 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 MFAP5Q13361 173 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 ELOAQ14241 798 aaKnown RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 ZNF169Q14929 603 aaPredicted RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 TLR1Q15399 786 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 NDUFA9Q16795 377 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 SPANXN3Q5MJ09 141 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 RBM20Q5T481 1227 aaKnown RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 MBOAT1Q6ZNC8 495 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 PALM2Q8IXS6 379 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 PSMF1Q92530 271 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 SLCO2A1Q92959 643 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 MACROD1Q9BQ69 325 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 NAT9Q9BTE0 207 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 ERRFI1Q9UJM3 462 aaPredicted RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 MKL2Q9ULH7 1088 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 MRPS2Q9Y399 296 aaKnown RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 MDC1Q14676 2089 aaKnown RBP13.5□□□□□ -0.25
NELFE-201ENST00000375425 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
NELFE-201ENST00000375425 IGHV1-45A0A0A0MS14 117 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 BMP10O95393 424 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 DDAH2O95865 285 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 SERPINA7P05543 415 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 IVDP26440 423 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 AVPR1BP47901 424 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 RPS15AP62244 130 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 CSNK1G2P78368 415 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 EEF1A2Q05639 463 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 NAE1Q13564 534 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 HP1BP3Q5SSJ5 553 aaPredicted RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 AGTRAPQ6RW13 159 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 KIAA0408Q6ZU52 694 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 VN1R4Q7Z5H5 301 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 ZC3H7AQ8IWR0 971 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 CNTN4Q8IWV2 1026 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 MYO1HQ8N1T3 1032 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 OR9A4Q8NGU2 314 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 BRIX1Q8TDN6 353 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 ALKBH8Q96BT7 664 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 PCBD2Q9H0N5 130 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 GRPEL1Q9HAV7 217 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 PPANQ9NQ55 473 aaKnown RBP13.49□□□□□ -0.25
NELFE-201ENST00000375425 PTGFRNQ9P2B2 879 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 SH2B3Q9UQQ2 575 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 HEATR5BQ9P2D3 2071 aa13.49□□□□□ -0.25
NELFE-201ENST00000375425 LOC102723996A0A087X1L8 192 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 A0A1W2PQ72 361 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 A1L4Q6 167 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 WIPF3A6NGB9 483 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 H0YIG0 161 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 SLC16A5O15375 505 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 LCMT2O60294 686 aaKnown RBP13.48□□□□□ -0.25
NELFE-201ENST00000375425 JRKO75564 520 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 HIST1H2AGP0C0S8 130 aaPredicted RBP13.48□□□□□ -0.25
NELFE-201ENST00000375425 NPPBP16860 134 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
NELFE-201ENST00000375425 HIST1H2ADP20671 130 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 EFNA3P52797 238 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 PGGT1BP53609 377 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 SP140Q13342 867 aa13.48□□□□□ -0.25
NELFE-201ENST00000375425 PHKG1Q16816 387 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms