RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CYP4F3Q08477 520 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TLDC1Q6P9B6 456 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 GPR135Q8IZ08 494 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TBC1D19Q8N5T2 526 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TEX9Q8N6V9 391 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 MFSD9Q8NBP5 474 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TCP10LQ8TDR4 215 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 N4BP2L2Q92802 583 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 PMEPA1Q969W9 287 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TLCD1Q96CP7 247 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 L3HYPDHQ96EM0 354 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 CTRCQ99895 268 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 SELENOSQ9BQE4 189 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 AIF1LQ9BQI0 150 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 TMEM121BQ9BXQ6 578 aaPredicted RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 ERVK-6Q9BXR3 956 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 C12orf65Q9H3J6 166 aaKnown RBP10.88□□□□□ -0.67
HSPG2-202ENST00000374676 NT5DC2Q9H857 520 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 THSD1Q9NS62 852 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 OXSMQ9NWU1 459 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 COPG2Q9UBF2 871 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 PCTPQ9UKL6 214 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 ANGPTL3Q9Y5C1 460 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 AP1M2Q9Y6Q5 423 aa10.88□□□□□ -0.67
HSPG2-202ENST00000374676 LOC105369274A0A096LPK9 316 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 LOC102723532A0A0G2JNH3 316 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 FITM1A5D6W6 292 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 E7EQ34 232 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 H0YGG7 62 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 TXNDC9O14530 226 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 PRPF4O43172 522 aaKnown RBP eCLIP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 LCMT2O60294 686 aaKnown RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 UGDHO60701 494 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 PRAMEF4O60810 478 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 OR2B3O76000 313 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 CAPNS1P04632 268 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 HBQ1P09105 142 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 AHRP35869 848 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 ETV4P43268 484 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 SCTRP47872 440 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 SLC18A1P54219 525 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 DNAJB13P59910 316 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 ARF3P61204 181 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 REEP5Q00765 189 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 IRF8Q02556 426 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 CHIT1Q13231 466 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 LAPTM5Q13571 262 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 DOC2AQ14183 400 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 DEFB110Q30KQ9 67 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 TBC1D25Q3MII6 688 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 UNC50Q53HI1 259 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF678Q5SXM1 525 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 YOD1Q5VVQ6 348 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 PRAMEF9Q5VWM5 478 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 FRMPD2BQ6IN97 320 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 PWWP2BQ6NUJ5 590 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 GOLGA7Q7Z5G4 137 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 TMPRSS11BQ86T26 416 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 OR4N4Q8N0Y3 316 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 KRT78Q8N1N4 520 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 CCDC63Q8NA47 563 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 ARMC2Q8NEN0 867 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 ZNF483Q8TF39 744 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 PTCD3Q96EY7 689 aaKnown RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 FAM111AQ96PZ2 611 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 SH3GL2Q99962 352 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 EFCAB11Q9BUY7 163 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 NTMT1Q9BV86 223 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 SPRTNQ9H040 489 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 IPPKQ9H8X2 491 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 GEMIN8Q9NWZ8 242 aaKnown RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 SLC17A7Q9P2U7 560 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 TMEM184BQ9Y519 407 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-202ENST00000374676 PCDHGA4Q9Y5G9 962 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 FER1L5A0AVI2 2057 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 FRYQ5TBA9 3013 aa10.87□□□□□ -0.67
HSPG2-202ENST00000374676 FEZF1A0PJY2 475 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 TM9SF1O15321 606 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 OR1F1O43749 312 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 SCRG1O75711 98 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 SASH3O75995 380 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 DLGAP3O95886 979 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 CTSBP07858 339 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 GSTM2P28161 218 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 BCL6P41182 706 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 HNF4AP41235 474 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 GCGRP47871 477 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 EMP3P54852 163 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 VSX2P58304 361 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 MAGOHP61326 146 aaKnown RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 MEF2AQ02078 507 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 CLCQ05315 142 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 GRM7Q14831 915 aa10.86□□□□□ -0.67
HSPG2-202ENST00000374676 HIST2H2ACQ16777 129 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-202ENST00000374676 PRTGQ2VWP7 1150 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms