RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 DMRT3Q9NQL9 472 aa18.88■□□□□ 0.61
HDAC1-201ENST00000373548 ELOVL7A1L3X0 281 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 SOCS2O14508 198 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 RFXANKO14593 260 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 RNGTTO60942 597 aaKnown RBP18.87■□□□□ 0.61
HDAC1-201ENST00000373548 CDH1P12830 882 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 RPL10P27635 214 aaKnown RBP18.87■□□□□ 0.61
HDAC1-201ENST00000373548 GZMMP51124 257 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 CLCNKAP51800 687 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 ADPRHP54922 357 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 C10orf62Q5T681 223 aaPredicted RBP18.87■□□□□ 0.61
HDAC1-201ENST00000373548 OR52E8Q6IFG1 317 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 PPP4R4Q6NUP7 873 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 CHST15Q7LFX5 561 aaPredicted RBP18.87■□□□□ 0.61
HDAC1-201ENST00000373548 ZNF740Q8NDX6 193 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 TNIP2Q8NFZ5 429 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 OR8J2Q8NGG1 315 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 FIG4Q92562 907 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 CENPKQ9BS16 269 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 UBAP1Q9NZ09 502 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 BTBD3Q9Y2F9 522 aa18.87■□□□□ 0.61
HDAC1-201ENST00000373548 GSTA4O15217 222 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 RPN2P04844 631 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 SLC35G4P0C7Q5 338 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ACP5P13686 325 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 TIA1P31483 386 aaKnown RBP eCLIP18.86■□□□□ 0.616e-7■■■□□ 18.9
HDAC1-201ENST00000373548 IGFALSP35858 605 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ASMTP46597 345 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 HIST2H2ACQ16777 129 aaPredicted RBP18.86■□□□□ 0.61
HDAC1-201ENST00000373548 DUOXA1Q1HG43 343 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 HIST2H2AA3Q6FI13 130 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ANKRD26P1Q6NSI1 321 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 DUS1LQ6P1R4 473 aaKnown RBP18.86■□□□□ 0.61
HDAC1-201ENST00000373548 MICU2Q8IYU8 434 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 SMRP1Q8NCR6 262 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 MENTQ9BUN1 341 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ARHGAP10A1A4S6 786 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 FAM220BPB1ANY3 271 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 SCAMP2O15127 329 aaKnown RBP18.86■□□□□ 0.61
HDAC1-201ENST00000373548 GMNNO75496 209 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 MT-ND1P03886 318 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 LAMP1P11279 417 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 TRPC1P48995 793 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 DMPKQ09013 629 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 LAPTM5Q13571 262 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ARHGAP19Q14CB8 494 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ATP6AP1Q15904 470 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 HKDC1Q2TB90 917 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 INTS11Q5TA45 600 aaKnown RBP18.86■□□□□ 0.61
HDAC1-201ENST00000373548 CAPRIN2Q6IMN6 1127 aaKnown RBP18.86■□□□□ 0.61
HDAC1-201ENST00000373548 GALNT18Q6P9A2 607 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ARMCX6Q7L4S7 300 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 RNF145Q96MT1 663 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 HAUS8Q9BT25 410 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ACAT2Q9BWD1 397 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 CHID1Q9BWS9 393 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 ZNF576Q9H609 170 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 FBRSQ9HAH7 460 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 FAM120CQ9NX05 1096 aaKnown RBP18.86■□□□□ 0.61
HDAC1-201ENST00000373548 PCDHGB4Q9UN71 923 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 WDR37Q9Y2I8 494 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 PCDHGB5Q9Y5G0 923 aa18.86■□□□□ 0.61
HDAC1-201ENST00000373548 KLHL33A6NCF5 533 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 FPGTO14772 594 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 YY2O15391 372 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 TGFB1P01137 390 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CEACAM5P06731 702 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 MAT2AP31153 395 aaKnown RBP18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CHN2P52757 468 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 SLC14A1Q13336 389 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 HORMAD1Q86X24 394 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 STARD8Q92502 1023 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 FAM120BQ96EK7 910 aaKnown RBP18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CNBD2Q96M20 576 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 TRIT1Q9H3H1 467 aaKnown RBP18.85■□□□□ 0.61
HDAC1-201ENST00000373548 FZD3Q9NPG1 666 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 SIRT5Q9NXA8 310 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 ACSL5Q9ULC5 683 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 ERVK-11Q9UQG0 969 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CXCR6O00574 342 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 PCDH7O60245 1069 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 GK3PQ14409 553 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CYP2A13Q16696 494 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 PYCR3Q53H96 274 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 ZNF551Q7Z340 670 aaPredicted RBP18.85■□□□□ 0.61
HDAC1-201ENST00000373548 FAM129CQ86XR2 697 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 TDHQ8IZJ6 230 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CBR4Q8N4T8 237 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 FAM86B1Q8N7N1 296 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 NECTIN4Q96NY8 510 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 PANX1Q96RD7 426 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 OR51B5Q9H339 312 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 CARS2Q9HA77 564 aaKnown RBP18.85■□□□□ 0.61
HDAC1-201ENST00000373548 ADGRE2Q9UHX3 823 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 SLC17A4Q9Y2C5 497 aa18.85■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3DA0A087WVF3 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3IA0A087WXS9 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3EA0A087X179 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 TBC1D3KA0A087X1G2 549 aa18.84■□□□□ 0.61
HDAC1-201ENST00000373548 GNG14A0A1W2PPG7 69 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms