RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ISLR2Q6UXK2 745 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 RIPOR1Q6ZS17 1223 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 CREG2Q8IUH2 290 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 LINGO1Q96FE5 620 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 THOC3Q96J01 351 aaKnown RBP17.96■□□□□ 0.47
TMEM53-201ENST00000372235 NDNQ99608 321 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 RIC8BQ9NVN3 520 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 ZFATQ9P243 1243 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 NUP210LQ5VU65 1888 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 IDSB3KWA1 339 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 NRP2O60462 931 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 MYBL2P10244 700 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 ELK3P41970 407 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 ELOAQ14241 798 aaKnown RBP17.95■□□□□ 0.46
TMEM53-201ENST00000372235 TLR1Q15399 786 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 VWA2Q5GFL6 755 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 CRB2Q5IJ48 1285 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 TEDDM1Q5T9Z0 273 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 GPATCH11Q8N954 259 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 DNAJB14Q8TBM8 379 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 METTL21AQ8WXB1 218 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 PDLIM5Q96HC4 596 aaKnown RBP17.95■□□□□ 0.46
TMEM53-201ENST00000372235 CAPZA3Q96KX2 299 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 LRRC4CQ9HCJ2 640 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 ARL15Q9NXU5 204 aa17.95■□□□□ 0.46
TMEM53-201ENST00000372235 COPG1Q9Y678 874 aaKnown RBP17.95■□□□□ 0.46
TMEM53-201ENST00000372235 NSA2O95478 260 aaKnown RBP17.94■□□□□ 0.46
TMEM53-201ENST00000372235 SLC35G6P0C7Q6 338 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 GP1BBP13224 206 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 IL10P22301 178 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 FOXL2P58012 376 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 MSS51Q4VC12 460 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 HECTD2Q5U5R9 776 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 STEAP4Q687X5 459 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 SLC26A11Q86WA9 606 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 PARP9Q8IXQ6 854 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 SNRNP40Q96DI7 357 aaKnown RBP17.94■□□□□ 0.46
TMEM53-201ENST00000372235 SGPP1Q9BX95 441 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 LUZP4Q9P127 313 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 C19orf25Q9UFG5 118 aaPredicted RBP17.94■□□□□ 0.46
TMEM53-201ENST00000372235 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
TMEM53-201ENST00000372235 CHMP2BQ9UQN3 213 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 TEX264Q9Y6I9 313 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 CCDC88CQ9P219 2028 aa17.94■□□□□ 0.46
TMEM53-201ENST00000372235 PCSK5Q92824 1860 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 A0A0A6YYC8 382 aaPredicted RBP17.93■□□□□ 0.46
TMEM53-201ENST00000372235 DYTNA2CJ06 578 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 EFCAB8A8MWE9 144 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 TCP11X1B4DZS4 312 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 I3L1I5 382 aaPredicted RBP17.93■□□□□ 0.46
TMEM53-201ENST00000372235 FOXS1O43638 330 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
TMEM53-201ENST00000372235 MED26O95402 600 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 DDAH2O95865 285 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 GABRB3P28472 473 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 TSFMP43897 325 aaKnown RBP17.93■□□□□ 0.46
TMEM53-201ENST00000372235 GLRBP48167 497 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 ITGA8P53708 1063 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 CDKN2DP55273 166 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 MGAT5Q09328 741 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 MFAP5Q13361 173 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 NAE1Q13564 534 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 PRSS58Q8IYP2 241 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 ARHGEF39Q8N4T4 335 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 NKAPQ8N5F7 415 aaKnown RBP17.93■□□□□ 0.46
TMEM53-201ENST00000372235 AMER3Q8N944 861 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 CFAP36Q96G28 342 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 VPS39Q96JC1 886 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 ZNF160Q9HCG1 818 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 ANKHQ9HCJ1 492 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 ADAMTS6Q9UKP5 1117 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 PCDHGA10Q9Y5H3 936 aa17.93■□□□□ 0.46
TMEM53-201ENST00000372235 FLNBO75369 2602 aaKnown RBP17.93■□□□□ 0.46
TMEM53-201ENST00000372235 LOC102723996A0A087X1L8 192 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 WFS1O76024 890 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 BMP10O95393 424 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 SERPINA7P05543 415 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 UQCRHP07919 91 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 F7P08709 466 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-201ENST00000372235 UQCRFS1P47985 274 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 CCR8P51685 355 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 CSNK1G2P78368 415 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 TIAL1Q01085 375 aaKnown RBP eCLIP17.92■□□□□ 0.46
TMEM53-201ENST00000372235 CALCOCO2Q13137 446 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 CBLBQ13191 982 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 ZNF169Q14929 603 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-201ENST00000372235 RBM20Q5T481 1227 aaKnown RBP17.92■□□□□ 0.46
TMEM53-201ENST00000372235 MAATS1Q7Z4T9 603 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 ASPGQ86U10 573 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 CISD2Q8N5K1 135 aaKnown RBP17.92■□□□□ 0.46
TMEM53-201ENST00000372235 ABHD11Q8NFV4 315 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 SLC13A3Q8WWT9 602 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 TUBB6Q9BUF5 446 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 SARGQ9BW04 601 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 ATG10Q9H0Y0 220 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 TEKT2Q9UIF3 430 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 MKL2Q9ULH7 1088 aa17.92■□□□□ 0.46
TMEM53-201ENST00000372235 SLC22A7Q9Y694 548 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms