RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 AMER2Q8N7J2 671 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RNF139Q8WU17 664 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SOCS4Q8WXH5 440 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TBC1D20Q96BZ9 403 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 AURKBQ96GD4 344 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RDH12Q96NR8 316 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 LGMNQ99538 433 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 EBNA1BP2Q99848 306 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 MED10Q9BTT4 135 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 CACNG4Q9UBN1 327 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 PNMA8BQ9ULN7 279 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 STAP1Q9ULZ2 295 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 CDYLQ9Y232 598 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 PDCD11Q14690 1871 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SYNJ2BP-COX16A0A087WUM0 186 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 FAM92AA1XBS5 289 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 M0QYT0 321 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 M0QZ92 97 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 STX16O14662 325 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 GRID2O43424 1007 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 MFSD11O43934 449 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 NRP2O60462 931 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 DUSP11O75319 330 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SRP72O76094 671 aaKnown RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RHOBTB1O94844 696 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 THRBP10828 461 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TGFBR1P36897 503 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 KCNC1P48547 511 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 ALDH3A2P51648 485 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TKTL1P51854 596 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 FOXC1Q12948 553 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 PLD1Q13393 1074 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 GPR139Q6DWJ6 353 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TBPL2Q6SJ96 375 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 ZDHHC13Q8IUH4 622 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 ADGRG2Q8IZP9 1017 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RBFAQ8N0V3 343 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 OR5T2Q8NGG2 359 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 WNT8BQ93098 351 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 RAD51AP1Q96B01 352 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SIPA1Q96FS4 1042 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 ZSWIM3Q96MP5 696 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SLC6A18Q96N87 628 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 SPATA13Q96N96 652 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TTLL2Q9BWV7 592 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 ILKAPQ9H0C8 392 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-203ENST00000372232 PIGVQ9NUD9 493 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 COX16Q9P0S2 106 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 LYVE1Q9Y5Y7 322 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 CEP350Q5VT06 3117 aa8.59□□□□□ -1.03
ATG4A-203ENST00000372232 TRIP12Q14669 1992 aaPredicted RBP8.59□□□□□ -1.04
ATG4A-203ENST00000372232 A0A0B4J293 547 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 A0A0U1RQS6 177 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 A0A1B0GWJ7 208 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 MROH6A6NGR9 719 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 NT5C1B-RDH14C9J2C7 533 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 SLCO1B7G3V0H7 640 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 DSCR3O14972 297 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 EFSO43281 561 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 CLN5O75503 358 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 ALDOAP04075 364 aaKnown RBP8.58□□□□□ -1.04
ATG4A-203ENST00000372232 THP07101 528 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 HPGDP15428 266 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 CD6P30203 668 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 OXTRP30559 389 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 TGFBR2P37173 567 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 LHX1P48742 406 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 RAB13P51153 203 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 HTRA3P83110 453 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 CREMQ03060 361 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 CD47Q08722 323 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 GBX1Q14549 363 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 CLCA4Q14CN2 919 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 MEP1AQ16819 746 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 ZIK1Q3SY52 487 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-203ENST00000372232 SPANXN2Q5MJ10 180 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 C5orf46Q6UWT4 87 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 TMEM86AQ8N2M4 240 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 TRPV1Q8NER1 839 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 OR6M1Q8NGM8 313 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 RNF31Q96EP0 1072 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 P2RY11Q96G91 374 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 PCED1BQ96HM7 432 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 HYLS1Q96M11 299 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 NECTIN4Q96NY8 510 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 ZCCHC4Q9H5U6 513 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 ESRP2Q9H6T0 727 aaKnown RBP8.58□□□□□ -1.04
ATG4A-203ENST00000372232 NMUR1Q9HB89 426 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 SPATA6Q9NWH7 488 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-203ENST00000372232 C14orf119Q9NWQ9 140 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 MIOSQ9NXC5 875 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 RAP2CQ9Y3L5 183 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 PCDHGA9Q9Y5G4 932 aaKnown RBP8.58□□□□□ -1.04
ATG4A-203ENST00000372232 TRPV2Q9Y5S1 764 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 MYBPHLA2RUH7 354 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 ARL5CA6NH57 179 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 YJEFN3A6XGL0 299 aa8.58□□□□□ -1.04
ATG4A-203ENST00000372232 HPRP00739 348 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms