RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ANKDD1BA6NHY2 528 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 CIB2O75838 187 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 CELA2BP08218 269 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 CHRM5P08912 532 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 HRH2P25021 359 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 C1orf61Q13536 156 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 SF1Q15637 639 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 BNC2Q6ZN30 1099 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 CLPTM1LQ96KA5 538 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 GID8Q9NWU2 228 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 BAIAP2L1Q9UHR4 511 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 LEF1Q9UJU2 399 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 EEDO75530 441 aaKnown RBP25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 ETHE1O95571 254 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 PTX3P26022 381 aaPredicted RBP25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 CMPK1P30085 196 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 CLDN8P56748 225 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 NXPH1P58417 271 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 WASHC2DQ5SRD0 308 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 PGM2L1Q6PCE3 622 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 TSSK4Q6SA08 328 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 RETREG3Q86VR2 466 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 FAM46DQ8NEK8 389 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 OR2L3Q8NG85 312 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 CHTF18Q8WVB6 975 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 VPS33AQ96AX1 596 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 C11orf24Q96F05 449 aaPredicted RBP25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 SLC45A3Q96JT2 553 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 CAAP1Q9H8G2 361 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 PRMT8Q9NR22 394 aaPredicted RBP25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 TMEM184CQ9NVA4 438 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 EML5Q05BV3 1969 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 CEP192Q8TEP8 1941 aa25.27■■□□□ 1.64
ATPAF1-202ENST00000371937 ABCA7Q8IZY2 2146 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 VILLO15195 856 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 CFLARO15519 480 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 SDC1P18827 310 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 CLNS1AP54105 237 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 UBE2IP63279 158 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 CSNK1G2P78368 415 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 RIPK1Q13546 671 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 GPR18Q14330 331 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 C6orf163Q5TEZ5 329 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 ADCK2Q7Z695 626 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 NAGSQ8N159 534 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 SPHK1Q9NYA1 384 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 SLC7A8Q9UHI5 535 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 CROTQ9UKG9 612 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 A8MUI8 341 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 ISM1B1AKI9 464 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 BCAT2O15382 392 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 PEBP1P30086 187 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 GRK3P35626 688 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 AFF3P51826 1226 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 PSME3P61289 254 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 KIR2DS3Q14952 304 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 TIGD2Q4W5G0 525 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 FBXW10Q5XX13 1052 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 SLC9B2Q86UD5 537 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 GKN2Q86XP6 184 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 RBM12BQ8IXT5 1001 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 ADGRF3Q8IZF5 1079 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 FBXW8Q8N3Y1 598 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 SLC37A2Q8TED4 501 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 ZDHHC1Q8WTX9 485 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 JPH3Q8WXH2 748 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 NECAB3Q96P71 396 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 CDRT15Q96T59 188 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 DENND2DQ9H6A0 471 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 SIRT5Q9NXA8 310 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 MAP10Q9P2G4 905 aa25.26■■□□□ 1.63
ATPAF1-202ENST00000371937 ARHGEF17Q96PE2 2063 aaPredicted RBP25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 LAMTOR5O43504 91 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 TGFB1P01137 390 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 IL6P05231 212 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 FNTBP49356 437 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 MTTPP55157 894 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 NET1Q7Z628 596 aaPredicted RBP25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 WDR5BQ86VZ2 330 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 C1orf52Q8N6N3 182 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 TTLQ8NG68 377 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 PATE1Q8WXA2 126 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 HOPXQ9BPY8 73 aaPredicted RBP25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 CLMPQ9H6B4 373 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 SPASTQ9UBP0 616 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 PCDHGA7Q9Y5G6 932 aa25.25■■□□□ 1.63
ATPAF1-202ENST00000371937 IGKV1-8A0A0C4DH67 115 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 FAM221BA6H8Z2 402 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 NPPAP01160 153 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 C21orf59P57076 290 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 HNRNPKP61978 463 aaKnown RBP eCLIP25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 GALNT18Q6P9A2 607 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 ARMCX6Q7L4S7 300 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 TBC1D19Q8N5T2 526 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 TSSK3Q96PN8 268 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 SNX7Q9UNH6 387 aa25.24■■□□□ 1.63
ATPAF1-202ENST00000371937 BTN3A3O00478 584 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 OR1F1O43749 312 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 PRMT3O60678 531 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms