RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 USP53Q70EK8 1073 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 RBM12BQ8IXT5 1001 aaKnown RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 KBTBD2Q8IY47 623 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 AGBL5Q8NDL9 886 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 DDHD1Q8NEL9 900 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 HEXDCQ8WVB3 486 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 ULK4Q96C45 1275 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CCDC74BQ96LY2 380 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 GPR78Q96P69 363 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 NUDT22Q9BRQ3 303 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 YTHDF1Q9BYJ9 559 aaKnown RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 NUF2Q9BZD4 464 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CAB39LQ9H9S4 337 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 UCK1Q9HA47 277 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 SPAG4Q9NPE6 437 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 IL26Q9NPH9 171 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 POT1Q9NUX5 634 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 TUBA8Q9NY65 449 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 XPR1Q9UBH6 696 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CPNE7Q9UBL6 633 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 PTBP2Q9UKA9 531 aaKnown RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 PCDHB11Q9Y5F2 797 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 ZFC3H1O60293 1989 aaKnown RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 TRBV23OR9-2A0A075B6M9 112 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 IGHV5-10-1A0A0J9YXX1 117 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 LILRA5A6NI73 299 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 AQP12BA6NM10 295 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SYCE1LA8MT33 242 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CFAP99D6REC4 459 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 J3QKU1 62 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 IFRD1O00458 451 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SDHDO14521 159 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CFLARO15519 480 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 NRP2O60462 931 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 MTX2O75431 263 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SRP72O76094 671 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 PRAMEF1O95521 474 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 C8BP07358 591 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 LIPCP11150 499 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 XRCC1P18887 633 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SAT1P21673 171 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CD9P21926 228 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 EPHA3P29320 983 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SLC5A2P31639 672 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 AKT1P31749 480 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TTKP33981 857 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 MRPL19P49406 292 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 MAPK10P53779 464 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 RAB15P59190 212 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TAS2R39P59534 338 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 ATP6V0D1P61421 351 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TUBA4AP68366 448 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 PRAMEP78395 509 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 IRF9Q00978 393 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 DMPKQ09013 629 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 BNIP2Q12982 314 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 LSAMPQ13449 338 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 NFATC2Q13469 925 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 FASTKQ14296 549 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 C16orf72Q14CZ0 275 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CNPY1Q3B7I2 92 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TECRLQ5HYJ1 363 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF648Q5T619 568 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 KIAA1614Q5VZ46 1190 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 LPCAT4Q643R3 524 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 WDR74Q6RFH5 385 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 ABRAXAS1Q6UWZ7 409 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 WASH2PQ6VEQ5 465 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 B3GNT6Q6ZMB0 384 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CCDC81Q6ZN84 652 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SPATA24Q86W54 205 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TICAM1Q8IUC6 712 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 PLXDC1Q8IUK5 500 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 AQP12AQ8IXF9 295 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CENPLQ8N0S6 344 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 CCDC124Q96CT7 223 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 RCN3Q96D15 328 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 MED8Q96G25 268 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 UBXN10Q96LJ8 280 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SEMA6CQ9H3T2 930 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TFB2MQ9H5Q4 396 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 WDR55Q9H6Y2 383 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 ASB8Q9H765 288 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TIMMDC1Q9NPL8 285 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 WASH6PQ9NQA3 447 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 PTTG2Q9NZH5 202 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 ADA2Q9NZK5 511 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 AP3M1Q9Y2T2 418 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 TRAF6Q9Y4K3 522 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 PCYT1BQ9Y5K3 369 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-202ENST00000371820 COMMD10Q9Y6G5 202 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 AHCTF1Q8WYP5 2266 aa10.05□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF106Q9H2Y7 1883 aaKnown RBP10.04□□□□□ -0.8
COL5A1-202ENST00000371820 ACOT8O14734 319 aa10.04□□□□□ -0.8
COL5A1-202ENST00000371820 PHGDHO43175 533 aaKnown RBP10.04□□□□□ -0.8
COL5A1-202ENST00000371820 DNAJA2O60884 412 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms