RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SLC27A1Q6PCB7 646 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 UNC93AQ86WB7 457 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 MMAAQ8IVH4 418 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 NAT16Q8N8M0 369 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SLC35G5Q96KT7 338 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ERVK-18Q9QC07 812 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 RAB19A4D1S5 217 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ADAM10O14672 748 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 HTRA2O43464 458 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TLX2O43763 284 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TFP02787 698 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 PNCKQ6P2M8 343 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 LAS2Q8IYD9 372 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ZBTB2Q8N680 514 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 TM6SF2Q9BZW4 377 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 MEAF6Q9HAF1 191 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 KCNJ16Q9NPI9 418 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 BAZ2AQ9UIF9 1905 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 RETP07949 1114 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 OR10T2Q8NGX3 314 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 OR8K5Q8NH50 307 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 MYRFLQ96LU7 910 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 OSMRQ99650 979 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF821O75541 412 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 MAOAP21397 527 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 IL12BP29460 328 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 CYCSP99999 105 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 GRM3Q14832 879 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 CARD16Q5EG05 197 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 SLC36A4Q6YBV0 504 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 MAP4K3Q8IVH8 894 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 LILRB4Q8NHJ6 448 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 CPT1BQ92523 772 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 AGO3Q9H9G7 860 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 DPP7Q9UHL4 492 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 AGO1Q9UL18 857 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 NUP205Q92621 2012 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ACKR2O00590 384 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 ELFN1P0C7U0 828 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 NDUFAF5Q5TEU4 345 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 GPR157Q5UAW9 335 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 FAM171A1Q5VUB5 890 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 UGT2A3Q6UWM9 527 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 OR7D4Q8NG98 312 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 FAXDC2Q96IV6 333 aa14.88□□□□□ -0.03
COL5A1-201ENST00000371817 HNRNPABQ99729 332 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 RUVBL1Q9Y265 456 aaKnown RBP14.88□□□□□ -0.03
COL5A1-201ENST00000371817 EFCAB7A8K855 629 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 UCHL1P09936 223 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RPS14P62263 151 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 SLC25A52Q3SY17 297 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 FAM109AQ8N4B1 249 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 CNOT9Q92600 299 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 CD180Q99467 661 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 PSD2Q9BQI7 771 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 TAPBPLQ9BX59 468 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RHPN2P1A8MT19 583 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 PSMD10O75832 226 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ATE1O95260 518 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 C7P10643 843 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RABL3Q5HYI8 236 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RAB41Q5JT25 222 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 HSDL2Q6YN16 418 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ILDR1Q86SU0 546 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 NUFIP1Q9UHK0 495 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 CRTAPO75718 401 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 HTR1AP08908 422 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF286BP0CG31 522 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 PKMP14618 531 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 PSKH2Q96QS6 385 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 TAS2R8Q9NYW2 309 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 PTPRJQ12913 1337 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 A0A1B0GV50 99 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 OR7A17O14581 309 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 CTPS1P17812 591 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 LRRN4Q8WUT4 740 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 MED30Q96HR3 178 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF578Q96N58 590 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 MKKSQ9NPJ1 570 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 P2RX2Q9UBL9 471 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 MGAT4BQ9UQ53 548 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 CLIC1O00299 241 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RASAL1O95294 804 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 FCER2P06734 321 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 FIP1L1Q6UN15 594 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 SUSD6Q92537 303 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 BORCS8Q96FH0 119 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF317Q96PQ6 595 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 FBXL21Q9UKT6 434 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 EXOSC1Q9Y3B2 195 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RP1L1Q8IWN7 2480 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ADAMTS3O15072 1205 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ARPC5O15511 151 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 BCAS1O75363 584 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 POMCP01189 267 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 OR8U9P0C7N5 309 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 GSTM2P28161 218 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 TAGLNQ01995 201 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ST3GAL4Q11206 333 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms