RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TMEM26Q6ZUK4 368 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 CHDHQ8NE62 594 aaPredicted RBP27.93■■■□□ 2.06
SSBP3-204ENST00000371320 CHTF18Q8WVB6 975 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 IL1RAPQ9NPH3 570 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 VNN3Q9NY84 501 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 GULP1Q9UBP9 304 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 TMEFF2Q9UIK5 374 aaPredicted RBP27.93■■■□□ 2.06
SSBP3-204ENST00000371320 GABRR3A8MPY1 467 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 KDELR2P33947 212 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 MEP1AQ16819 746 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 HKDC1Q2TB90 917 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 ZNF658BQ4V348 819 aaPredicted RBP27.93■■■□□ 2.06
SSBP3-204ENST00000371320 SPIN4Q56A73 249 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 TMPRSS11BQ86T26 416 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 PTOV1Q86YD1 416 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 SYTL1Q8IYJ3 562 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 GPR156Q8NFN8 814 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 ZNF480Q8WV37 535 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 DOK1Q99704 481 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 ZCCHC2Q9C0B9 1178 aaKnown RBP27.93■■■□□ 2.06
SSBP3-204ENST00000371320 OR2AG1Q9H205 316 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 FANCEQ9HB96 536 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 SLC27A6Q9Y2P4 619 aa27.93■■■□□ 2.06
SSBP3-204ENST00000371320 HOXC11O43248 304 aaPredicted RBP27.92■■■□□ 2.06
SSBP3-204ENST00000371320 SPINT1O43278 529 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 SOD1P00441 154 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 PPIGQ13427 754 aaKnown RBP eCLIP27.92■■■□□ 2.064e-9■■□□□ 14.2
SSBP3-204ENST00000371320 GTF2H3Q13889 308 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 SKIV2LQ15477 1246 aaKnown RBP27.92■■■□□ 2.06
SSBP3-204ENST00000371320 BCL7AQ4VC05 210 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 CAPN13Q6MZZ7 669 aaPredicted RBP27.92■■■□□ 2.06
SSBP3-204ENST00000371320 MED27Q6P2C8 311 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 EP400NLQ6ZTU2 488 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 TRAPPC5Q8IUR0 188 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 VPS37AQ8NEZ2 397 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 NXPE3Q969Y0 559 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 DPH2Q9BQC3 489 aaPredicted RBP27.92■■■□□ 2.06
SSBP3-204ENST00000371320 TPT1P8Q9HAU6 139 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 ABCG2Q9UNQ0 655 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 MAPRE3Q9UPY8 281 aa27.92■■■□□ 2.06
SSBP3-204ENST00000371320 MYO7AQ13402 2215 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 MGAT4DA6NG13 374 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 H3BMQ9 156 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 ABCB7O75027 752 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 JUNBP17275 347 aaPredicted RBP27.91■■■□□ 2.06
SSBP3-204ENST00000371320 HPCAL1P37235 193 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 RPS13P62277 151 aaKnown RBP27.91■■■□□ 2.06
SSBP3-204ENST00000371320 TSTA3Q13630 321 aaPredicted RBP27.91■■■□□ 2.06
SSBP3-204ENST00000371320 OR2T5Q6IEZ7 315 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 GPR155Q7Z3F1 870 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 GALNT10Q86SR1 603 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 FBXO15Q8NCQ5 510 aaPredicted RBP27.91■■■□□ 2.06
SSBP3-204ENST00000371320 OR2T29Q8NH02 315 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 GAB3Q8WWW8 586 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 TBC1D20Q96BZ9 403 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 COG8Q96MW5 612 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 DCUN1D5Q9BTE7 237 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 GNG14A0A1W2PPG7 69 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 ATE1O95260 518 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 TBPL1P62380 186 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 RBM23Q86U06 439 aaKnown RBP27.91■■■□□ 2.06
SSBP3-204ENST00000371320 REPS1Q96D71 796 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 CNDP2Q96KP4 475 aaKnown RBP27.91■■■□□ 2.06
SSBP3-204ENST00000371320 TM9SF3Q9HD45 589 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 WBP1LQ9NX94 342 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 BTNL2Q9UIR0 455 aa27.91■■■□□ 2.06
SSBP3-204ENST00000371320 K7ESM1 405 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 PNLIPRP1P54315 467 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 CD47Q08722 323 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 MESP2Q0VG99 397 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 E2F2Q14209 437 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 CTU2Q2VPK5 515 aaKnown RBP27.9■■■□□ 2.06
SSBP3-204ENST00000371320 FNDC3BQ53EP0 1204 aaKnown RBP27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ZC3H12BQ5HYM0 836 aaKnown RBP27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ANXA8L1Q5VT79 327 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 OR13F1Q8NGS4 319 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 SNX19Q92543 992 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ZNF707Q96C28 371 aaPredicted RBP27.9■■■□□ 2.06
SSBP3-204ENST00000371320 NUS1Q96E22 293 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 BAG5Q9UL15 447 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 BLOC1S6Q9UL45 172 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 CDH7Q9ULB5 785 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 PRRT4C9JH25 899 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 FABP3P05413 133 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 HLA-EP13747 358 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 IGFBP5P24593 272 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ITGB7P26010 798 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 GPR1P46091 355 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ARHGDIAP52565 204 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 HPCAP84074 193 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 DCTN2Q13561 401 aaKnown RBP27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ZNF691Q5VV52 312 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 RAET1GQ6H3X3 334 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 ARRDC3Q96B67 414 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 RSPRY1Q96DX4 576 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 PHF12Q96QT6 1004 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 DYRK1BQ9Y463 629 aa27.9■■■□□ 2.06
SSBP3-204ENST00000371320 MYO1GB0I1T2 1018 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 SLC16A6O15403 523 aa27.89■■■□□ 2.06
SSBP3-204ENST00000371320 LILRB5O75023 590 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms