RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 THAP11Q96EK4 314 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 HIST1H2AHQ96KK5 128 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 RBBP8Q99708 897 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 HIST1H2AJQ99878 128 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 H2AFJQ9BTM1 129 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 ZNF304Q9HCX3 659 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 TUBB4AP04350 444 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 EIF2S1P05198 315 aaKnown RBP19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 MMP11P24347 488 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 OTX2P32243 289 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 GP5P40197 560 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 SOX8P57073 446 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 CAPN13Q6MZZ7 669 aaPredicted RBP19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 C17orf64Q86WR6 236 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 PTRH1Q86Y79 214 aaKnown RBP19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 METTL27Q8N6F8 245 aaPredicted RBP19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 AMER3Q8N944 861 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 NOA1Q8NC60 698 aaKnown RBP19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 CDKL2Q92772 493 aa19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 SPENQ96T58 3664 aaKnown RBP19.55■□□□□ 0.72
SMNDC1-201ENST00000369592 TXNDC9O14530 226 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 LCMT2O60294 686 aaKnown RBP19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 SAT1P21673 171 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 SLC26A3P40879 764 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 CSRP3P50461 194 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 RPS15AP62244 130 aaKnown RBP19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 DSG2Q14126 1118 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 FAM53BQ14153 422 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 KBTBD12Q3ZCT8 623 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 ATG14Q6ZNE5 492 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 RELL1Q8IUW5 271 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 KLHDC8AQ8IYD2 350 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 ATL1Q8WXF7 558 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 PYCR2Q96C36 320 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 UBXN10Q96LJ8 280 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 HAUS8Q9BT25 410 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 TRIM54Q9BYV2 358 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 TRIM4Q9C037 500 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 DERL2Q9GZP9 239 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 ACSS2Q9NR19 701 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 ABCF3Q9NUQ8 709 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 P4HTMQ9NXG6 502 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 DMGDHQ9UI17 866 aaKnown RBP19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 ANAPC2Q9UJX6 822 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 NXT1Q9UKK6 140 aaKnown RBP19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 MRPS2Q9Y399 296 aaKnown RBP19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 OARD1Q9Y530 152 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 MAU2Q9Y6X3 613 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 SCN3AQ9NY46 2000 aa19.54■□□□□ 0.72
SMNDC1-201ENST00000369592 NPEPPSL1A6NEC2 478 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 SOCS6O14544 535 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 CDH1P12830 882 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 BCL6P41182 706 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 CCL11P51671 97 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 RRADP55042 308 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 DCAF10Q5QP82 559 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 ASB18Q6ZVZ8 466 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 FDCSPQ8NFU4 85 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 STT3BQ8TCJ2 826 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 RERGQ96A58 199 aaPredicted RBP19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 CABS1Q96KC9 395 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 CAB39LQ9H9S4 337 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 GPAMQ9HCL2 828 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 PCDHGB7Q9Y5F8 929 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 HEMK1Q9Y5R4 338 aaPredicted RBP19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 HS3ST3B1Q9Y662 390 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 CNTRLQ7Z7A1 2325 aa19.53■□□□□ 0.72
SMNDC1-201ENST00000369592 UBR5O95071 2799 aaPredicted RBP19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 AGPSO00116 658 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 GUCA1CO95843 209 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 CASRP41180 1078 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 TSNQ15631 228 aaKnown RBP19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 GRTP1Q5TC63 336 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 KIRREL2Q6UWL6 708 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 ADCK2Q7Z695 626 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 ADAMTSL2Q86TH1 951 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 CCDC25Q86WR0 208 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 FBF1Q8TES7 1133 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 SMAD5Q99717 465 aaKnown RBP19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 SLC25A23Q9BV35 468 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 NUDT9Q9BW91 350 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 FAM129AQ9BZQ8 928 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 TGIF2Q9GZN2 237 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 CDC14AQ9UNH5 594 aa19.52■□□□□ 0.72
SMNDC1-201ENST00000369592 A0A1W2PQ72 361 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 FEZF1A0PJY2 475 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 KIF2AO00139 706 aaPredicted RBP19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 FAM155BO75949 473 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 IGHEP01854 428 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 ZGLP1P0C6A0 271 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 ECHS1P30084 290 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 STX2P32856 288 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 SLC6A12P48065 614 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 KLRB1Q12918 225 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 NAB1Q13506 487 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 USP10Q14694 798 aaKnown RBP19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 TMEM214Q6NUQ4 689 aaKnown RBP19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 MFSD9Q8NBP5 474 aa19.51■□□□□ 0.71
SMNDC1-201ENST00000369592 NEIL2Q969S2 332 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms