RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PLCL1Q15111 1095 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 RBBP5Q15291 538 aaKnown RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 SF1Q15637 639 aaKnown RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 PRRT3Q5FWE3 981 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 WASHC2DQ5SRD0 308 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 C1orf146Q5VVC0 180 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 SLC36A4Q6YBV0 504 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 NET1Q7Z628 596 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 ADCK2Q7Z695 626 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 AMIGO1Q86WK6 493 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 DCP2Q8IU60 420 aaKnown RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 TRIM48Q8IWZ4 208 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 FAM20CQ8IXL6 584 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 TMEFF1Q8IYR6 380 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 FBXW8Q8N3Y1 598 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 C1orf52Q8N6N3 182 aaKnown RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 GPR156Q8NFN8 814 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 OR4E2Q8NGC2 313 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 ROPN1LQ96C74 230 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 PRAP1Q96NZ9 151 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 LRRC61Q9BV99 259 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 RASSF4Q9H2L5 321 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 TM9SF3Q9HD45 589 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 SPHK1Q9NYA1 384 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 DLGAP2Q9P1A6 1054 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 LEF1Q9UJU2 399 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 CROTQ9UKG9 612 aa16.16■□□□□ 0.18
PHGDH-202ENST00000369409 RUVBL1Q9Y265 456 aaKnown RBP16.16■□□□□ 0.18
PHGDH-202ENST00000369409 DNAH14Q0VDD8 3507 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 FEZF1A0PJY2 475 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 FOXE1O00358 373 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-202ENST00000369409 PRICKLE3O43900 615 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-202ENST00000369409 TGFB1P01137 390 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 ACPPP15309 386 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 PRDX1Q06830 199 aaKnown RBP16.15■□□□□ 0.18
PHGDH-202ENST00000369409 PAGE3Q5JUK9 113 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 C6orf163Q5TEZ5 329 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 IYDQ6PHW0 289 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 TSSK4Q6SA08 328 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 ARMCX6Q7L4S7 300 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 VN1R5Q7Z5H4 357 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 SFTPA2Q8IWL1 248 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 NECAB3Q96P71 396 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-202ENST00000369409 SERPINI1Q99574 410 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 ADA2Q9NZK5 511 aa16.15■□□□□ 0.18
PHGDH-202ENST00000369409 MDC1Q14676 2089 aaKnown RBP16.15■□□□□ 0.18
PHGDH-202ENST00000369409 IGKV1-8A0A0C4DH67 115 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 FXYD1O00168 92 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CHRM5P08912 532 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CXCR2P25025 360 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 PIK3CBP42338 1070 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CYP4F2P78329 520 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 NFYCQ13952 458 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 TLR1Q15399 786 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 TRMT5Q32P41 509 aaKnown RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 FAM174BQ3ZCQ3 159 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SPIN4Q56A73 249 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 PIGGQ5H8A4 983 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 C8orf82Q6P1X6 216 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SLC2A7Q6PXP3 512 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 IQCHQ86VS3 1027 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SYT12Q8IV01 421 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 RNF148Q8N7C7 305 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 ANKRD53Q8N9V6 530 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 EGLN2Q96KS0 407 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 OR51B5Q9H339 312 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SRMSQ9H3Y6 488 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CLMPQ9H6B4 373 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SLC6A20Q9NP91 592 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 MRPS30Q9NP92 439 aaKnown RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 OR6C2Q9NZP2 312 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 TSC22D4Q9Y3Q8 395 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 DYTNA2CJ06 578 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SAP18O00422 153 aaKnown RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 MYO1DO94832 1006 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 LRATO95237 230 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 VIPP01282 170 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CLDN8P56748 225 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CSNK1G2P78368 415 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 RAE1P78406 368 aaKnown RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CEACAM7Q14002 265 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 GPR18Q14330 331 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CAPRIN1Q14444 709 aaKnown RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SPANXN4Q5MJ08 99 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 PLD3Q8IV08 490 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 FAM9CQ8IZT9 166 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 FBXL6Q8N531 539 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 GLB1L3Q8NCI6 653 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 OR2L3Q8NG85 312 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 OR4K1Q8NGD4 311 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CDC26Q8NHZ8 85 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SLC37A2Q8TED4 501 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 C11orf24Q96F05 449 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 METTL2AQ96IZ6 378 aaKnown RBP16.14■□□□□ 0.17
PHGDH-202ENST00000369409 SPAG4Q9NPE6 437 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 CPNE7Q9UBL6 633 aa16.14■□□□□ 0.17
PHGDH-202ENST00000369409 ISM1B1AKI9 464 aa16.13■□□□□ 0.17
PHGDH-202ENST00000369409 TLR4O00206 839 aa16.13■□□□□ 0.17
PHGDH-202ENST00000369409 ERFP50548 548 aa16.13■□□□□ 0.17
PHGDH-202ENST00000369409 ZNF423Q2M1K9 1284 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms