RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 COQ10AQ96MF6 247 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 OSGEPL1Q9H4B0 414 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 INTS7Q9NVH2 962 aaKnown RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 C2orf42Q9NWW7 574 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 OBP2AQ9NY56 170 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 DKK3Q9UBP4 350 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 SLC22A14Q9Y267 594 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 CARD8Q9Y2G2 431 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 ZFC3H1O60293 1989 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 H0Y8X5 98 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 KPNA4O00629 521 aaPredicted RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 EI24O14681 340 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 MLYCDO95822 493 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 RPS17P08708 135 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 UROSP10746 265 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 EEF1B2P24534 225 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 PXNP49023 591 aaPredicted RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 CLDN2P57739 230 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 DDX39BQ13838 428 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 FGL2Q14314 439 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ZIK1Q3SY52 487 aaPredicted RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 PPP4R4Q6NUP7 873 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 PLPP6Q8IY26 295 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SLC44A3Q8N4M1 653 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 TMIEQ8NEW7 156 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 OR2T11Q8NH01 316 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 HTRA1Q92743 480 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ADI1Q9BV57 179 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 MIR1-1HGQ9H1L0 117 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 NANOGQ9H9S0 305 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ACTR3BQ9P1U1 418 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 GULP1Q9UBP9 304 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 LEF1Q9UJU2 399 aaPredicted RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 PLEKHM1Q9Y4G2 1056 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 GPR45Q9Y5Y3 372 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 AQP12BA6NM10 295 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 OR7A17O14581 309 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 JRKO75564 520 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 WDR47O94967 919 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 CCNA2P20248 432 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 TUBA4AP68366 448 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ELP6Q0PNE2 266 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 WSCD2Q2TBF2 565 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 NHSL2Q5HYW2 709 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 LYPLAL1Q5VWZ2 237 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SPATA19Q7Z5L4 167 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 AQP12AQ8IXF9 295 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 HMGB4Q8WW32 186 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 TRUB1Q8WWH5 349 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 ZUFSPQ96AP4 578 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 LRIG1Q96JA1 1093 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 IL17FQ96PD4 163 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 CSF3RQ99062 836 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 C9orf16Q9BUW7 83 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ACAT2Q9BWD1 397 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 OPTCQ9UBM4 332 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ANAPC2Q9UJX6 822 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 NUP214P35658 2090 aaPredicted RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 TSPAN11A1L157 253 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 PABPN1LA6NDY0 278 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 LOC730098B7Z3J9 87 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 BMP2P12643 396 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 DGKQP52824 942 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 MTPNP58546 118 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SLC13A2Q13183 592 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 STARD3Q14849 445 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SF1Q15637 639 aaKnown RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 PTCHD3Q3KNS1 767 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SUSD1Q6UWL2 747 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 PEX5LQ8IYB4 626 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SLC22A15Q8IZD6 547 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ANKFN1Q8N957 763 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 ULK4Q96C45 1275 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 RHBDF1Q96CC6 855 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 CENPNQ96H22 339 aaPredicted RBP10.31□□□□□ -0.76
TPM3-212ENST00000368533 ARMC1Q9NVT9 282 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 SLC23A2Q9UGH3 650 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 CA14Q9ULX7 337 aa10.31□□□□□ -0.76
TPM3-212ENST00000368533 A0A1W2PQU0 124 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 HIST1H2AGP0C0S8 130 aaPredicted RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 SLC2A4P14672 509 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 HIST1H2ADP20671 130 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 PPP2CBP62714 309 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 PPP2CAP67775 309 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 MERTKQ12866 999 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 ABRAXAS2Q15018 415 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 CCDC58Q4VC31 144 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 C6orf136Q5SQH8 315 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 ADNP2Q6IQ32 1131 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 FAM83HQ6ZRV2 1179 aaPredicted RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 EFL1Q7Z2Z2 1120 aaKnown RBP10.3□□□□□ -0.76
TPM3-212ENST00000368533 MILR1Q7Z6M3 343 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 ZNF547Q8IVP9 402 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 DEFB119Q8N690 84 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 TRPV3Q8NET8 790 aa10.3□□□□□ -0.76
TPM3-212ENST00000368533 CLHC1Q8NHS4 586 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms