RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ZNF678Q5SXM1 525 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 DCAF12Q5T6F0 453 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 PRAMEF17Q5VTA0 474 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 OR4K1Q8NGD4 311 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 OR1L3Q8NH93 324 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 TRPC4APQ8TEL6 797 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 ZNF501Q96CX3 271 aaPredicted RBP13.31□□□□□ -0.28
TPM3-211ENST00000368531 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 CDK15Q96Q40 435 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 AIF1LQ9BQI0 150 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 NRSN2Q9GZP1 204 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 ACTR8Q9H981 624 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 SYNPO2LQ9H987 977 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 PELI2Q9HAT8 420 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 ZBTB26Q9HCK0 441 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 OXSMQ9NWU1 459 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 SERTAD3Q9UJW9 196 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 PILRAQ9UKJ1 303 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 MSRB2Q9Y3D2 182 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 KLK4Q9Y5K2 254 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 B3GALT1Q9Y5Z6 326 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 SPTBP11277 2137 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 H0YGG7 62 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 PPP6CO00743 305 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 OR7A17O14581 309 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 TM9SF1O15321 606 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 OR2B3O76000 313 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ZWINTO95229 277 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 TIAF1O95411 115 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 NEFHP12036 1026 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 BCL6P41182 706 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 CCR10P46092 362 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 PIK3CGP48736 1102 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ITGA1P56199 1179 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
TPM3-211ENST00000368531 CYP4F2P78329 520 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 REEP5Q00765 189 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 CLCQ05315 142 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 IL11RAQ14626 422 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 CFAP157Q5JU67 520 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 TMEM164Q5U3C3 297 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 HHATQ5VTY9 493 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 LIPMQ5VYY2 423 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ATG9BQ674R7 924 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 CEACAM20Q6UY09 585 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 RNF44Q7L0R7 432 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ERMP1Q7Z2K6 904 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 PPP1R3BQ86XI6 285 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 TMEM126BQ8IUX1 230 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 GPR135Q8IZ08 494 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 TBC1D19Q8N5T2 526 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ZNF655Q8N720 491 aaPredicted RBP13.3□□□□□ -0.28
TPM3-211ENST00000368531 OR52B6Q8NGF0 335 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 ZNF483Q8TF39 744 aaPredicted RBP13.3□□□□□ -0.28
TPM3-211ENST00000368531 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
TPM3-211ENST00000368531 NXPE2Q96DL1 559 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 L3HYPDHQ96EM0 354 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 SLC46A1Q96NT5 459 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 MACROD1Q9BQ69 325 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 SLC7A5P2Q9GIP4 190 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 CHRNA10Q9GZZ6 450 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 GEMIN8Q9NWZ8 242 aaKnown RBP13.3□□□□□ -0.28
TPM3-211ENST00000368531 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 PCDHGA8Q9Y5G5 932 aa13.3□□□□□ -0.28
TPM3-211ENST00000368531 TRBC2A0A5B9 178 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 HMGB1P1B2RPK0 211 aaPredicted RBP13.29□□□□□ -0.28
TPM3-211ENST00000368531 C9orf172C9J069 976 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 BRINP1O60477 761 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 TRIM13O60858 407 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 NTRK1P04629 796 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 BPGMP07738 259 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 PCNAP12004 261 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 FGF5P12034 268 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 CD22P20273 847 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 SLC5A2P31639 672 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 ETV4P43268 484 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 SERPINB4P48594 390 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 RAB15P59190 212 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 DNAJB13P59910 316 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 RPS15AP62244 130 aaKnown RBP13.29□□□□□ -0.28
TPM3-211ENST00000368531 RTP5Q14D33 572 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 WASHC2DQ5SRD0 308 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 FAM219BQ5XKK7 198 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 PWWP2BQ6NUJ5 590 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 METTL2BQ6P1Q9 378 aaKnown RBP13.29□□□□□ -0.28
TPM3-211ENST00000368531 CYB5D1Q6P9G0 228 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 ZCCHC23Q6ZST2 131 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 MILR1Q7Z6M3 343 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 NUDCD3Q8IVD9 361 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 KRT78Q8N1N4 520 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 CCT6BQ92526 530 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 PTCD3Q96EY7 689 aaKnown RBP13.29□□□□□ -0.28
TPM3-211ENST00000368531 OR2A5Q96R48 311 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 GATA5Q9BWX5 397 aaPredicted RBP13.29□□□□□ -0.28
TPM3-211ENST00000368531 C1QTNF3Q9BXJ4 246 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 SHCBP1LQ9BZQ2 653 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 GSTO2Q9H4Y5 243 aa13.29□□□□□ -0.28
TPM3-211ENST00000368531 WDR70Q9NW82 654 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms