RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ANAPC2Q9UJX6 822 aa18.04■□□□□ 0.48
CKS1B-203ENST00000368439 MRPS2Q9Y399 296 aaKnown RBP18.04■□□□□ 0.48
CKS1B-203ENST00000368439 NPEPPSL1A6NEC2 478 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 LCMT2O60294 686 aaKnown RBP18.03■□□□□ 0.48
CKS1B-203ENST00000368439 GUCA1CO95843 209 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 MMP11P24347 488 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 CASRP41180 1078 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 RRADP55042 308 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 POU4F1Q01851 419 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 ILF2Q12905 390 aaKnown RBP18.03■□□□□ 0.48
CKS1B-203ENST00000368439 KLRB1Q12918 225 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 DCAF10Q5QP82 559 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 CCDC25Q86WR0 208 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 C17orf64Q86WR6 236 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 AMER3Q8N944 861 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 ABHD11Q8NFV4 315 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 OR4K1Q8NGD4 311 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 CDKL2Q92772 493 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 COL26A1Q96A83 441 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 ALKBH8Q96BT7 664 aaKnown RBP18.03■□□□□ 0.48
CKS1B-203ENST00000368439 TM4SF19Q96DZ7 209 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 GPR22Q99680 433 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 NUDT9Q9BW91 350 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 TRIM54Q9BYV2 358 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 EPN3Q9H201 632 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 SOX17Q9H6I2 414 aaPredicted RBP18.03■□□□□ 0.48
CKS1B-203ENST00000368439 CAB39LQ9H9S4 337 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 GPAMQ9HCL2 828 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 NXT1Q9UKK6 140 aaKnown RBP18.03■□□□□ 0.48
CKS1B-203ENST00000368439 HS3ST3B1Q9Y662 390 aa18.03■□□□□ 0.48
CKS1B-203ENST00000368439 MASP2O00187 686 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 TXNDC9O14530 226 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 SOCS6O14544 535 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 CDH1P12830 882 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 GP5P40197 560 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 SLC26A3P40879 764 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 BCL6P41182 706 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 RPS15AP62244 130 aaKnown RBP18.02■□□□□ 0.48
CKS1B-203ENST00000368439 CDKL1Q00532 357 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 KBTBD12Q3ZCT8 623 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 SHISA6Q6ZSJ9 500 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 MMGT1Q8N4V1 131 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 STT3BQ8TCJ2 826 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 ATL1Q8WXF7 558 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 THAP11Q96EK4 314 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 HAUS8Q9BT25 410 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 SARGQ9BW04 601 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 TRIM4Q9C037 500 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 SCN3AQ9NY46 2000 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 OARD1Q9Y530 152 aa18.02■□□□□ 0.48
CKS1B-203ENST00000368439 FEZF1A0PJY2 475 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 AGPSO00116 658 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 STATHP02808 62 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 ZGLP1P0C6A0 271 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 FBLP22087 321 aaKnown RBP18.01■□□□□ 0.47
CKS1B-203ENST00000368439 PGDP52209 483 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 TLE1Q04724 770 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 KLC1Q07866 573 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 DSG2Q14126 1118 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 FAM53BQ14153 422 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 TSNQ15631 228 aaKnown RBP18.01■□□□□ 0.47
CKS1B-203ENST00000368439 ZKSCAN8Q15776 578 aaPredicted RBP18.01■□□□□ 0.47
CKS1B-203ENST00000368439 VWA2Q5GFL6 755 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 COLEC12Q5KU26 742 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 NOA1Q8NC60 698 aaKnown RBP18.01■□□□□ 0.47
CKS1B-203ENST00000368439 FBF1Q8TES7 1133 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 ZNF592Q92610 1267 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 FER1L6-AS2Q96M78 137 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 MACROD1Q9BQ69 325 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 MESP1Q9BRJ9 268 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 DERL2Q9GZP9 239 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 ZNF282Q9UDV7 671 aaPredicted RBP18.01■□□□□ 0.47
CKS1B-203ENST00000368439 DMGDHQ9UI17 866 aaKnown RBP18.01■□□□□ 0.47
CKS1B-203ENST00000368439 CDC14AQ9UNH5 594 aa18.01■□□□□ 0.47
CKS1B-203ENST00000368439 A0A0A6YYC8 382 aaPredicted RBP18■□□□□ 0.47
CKS1B-203ENST00000368439 A6NL46 340 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 I3L1I5 382 aaPredicted RBP18■□□□□ 0.47
CKS1B-203ENST00000368439 PEX12O00623 359 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 FFAR3O14843 346 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 GPR42O15529 346 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 PHGDHO43175 533 aaKnown RBP18■□□□□ 0.47
CKS1B-203ENST00000368439 FAM155BO75949 473 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 SOX8P57073 446 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 USP10Q14694 798 aaKnown RBP18■□□□□ 0.47
CKS1B-203ENST00000368439 CATSPEREQ5SY80 951 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 KIRREL2Q6UWL6 708 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 LAPTM4BQ86VI4 370 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 SHISA5Q8N114 240 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 MFSD9Q8NBP5 474 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 NEIL2Q969S2 332 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 MIEF2Q96C03 454 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 SMAD5Q99717 465 aaKnown RBP18■□□□□ 0.47
CKS1B-203ENST00000368439 DRC3Q9H069 523 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 SPNS1Q9H2V7 528 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 SEMA3GQ9NS98 782 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 CTNNAL1Q9UBT7 734 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 PCDHGB7Q9Y5F8 929 aa18■□□□□ 0.47
CKS1B-203ENST00000368439 PABPN1LA6NDY0 278 aaKnown RBP17.99■□□□□ 0.47
CKS1B-203ENST00000368439 IGHEP01854 428 aa17.99■□□□□ 0.47
CKS1B-203ENST00000368439 CD1DP15813 335 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms