RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 VSTM1Q6UX27 236 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LRRC69Q6ZNQ3 347 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LMNTD1Q8N9Z9 388 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC38A4Q969I6 547 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SGK3Q96BR1 496 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FGGYQ96C11 551 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 POLR1BQ9H9Y6 1135 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF282Q9UDV7 671 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC7A8Q9UHI5 535 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RNF112Q9ULX5 631 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LOC102724428A0A0B4J2F2 783 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PQBP1O60828 265 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MT-CO2P00403 227 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 AVPR1AP37288 418 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SIK1P57059 783 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NEPROQ6NW34 567 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FAM183BPQ6ZVS7 135 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PXKQ7Z7A4 578 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BOD1L2Q8IYS8 172 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZDHHC14Q8IZN3 488 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF276Q8N554 614 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 STOML3Q8TAV4 291 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RNF128Q8TEB7 428 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO32Q969P5 355 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CDK15Q96Q40 435 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CGRRF1Q99675 332 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GPR83Q9NYM4 423 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PIM2Q9P1W9 311 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 KIR3DL1P43629 444 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 INHBCP55103 352 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BEND4Q6ZU67 534 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NAXEQ8NCW5 288 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GATA6Q92908 595 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 REXO4Q9GZR2 422 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DUSP22Q9NRW4 184 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SMOXQ9NWM0 555 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HOXD12P35452 270 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HERVK_113P63132 956 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 IKZF1Q13422 519 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CD276Q5ZPR3 534 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF671Q8TAW3 534 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HGDQ93099 445 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TECTBQ96PL2 329 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MFRPQ9BY79 579 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NPVFQ9HCQ7 196 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NT5MQ9NPB1 228 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NKX1-2Q9UD57 310 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OGDHLQ9ULD0 1010 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 B4DEV8 164 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TSPAN15O95858 294 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 C8GP07360 202 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RARAP10276 462 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HTR2CP28335 458 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 KLHL17Q6TDP4 642 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CPNE8Q86YQ8 564 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 REM2Q8IYK8 340 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ADAMTS19Q8TE59 1207 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FAM120BQ96EK7 910 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SCMH1Q96GD3 660 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HIPK2Q9H2X6 1198 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CNTN6Q9UQ52 1028 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 COL1A2P08123 1366 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ACOT7O00154 380 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CDK2AP1O14519 115 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CKMP06732 381 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CHRNGP07510 517 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DHRS4L1P0CG22 281 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NKX6-1P78426 367 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 EIF4E3Q8N5X7 224 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM161BQ8NDZ6 487 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 VANGL1Q8TAA9 524 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MED10Q9BTT4 135 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR11A1Q9GZK7 315 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ANKMY1Q9P2S6 941 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SSNA1O43805 119 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HMGA1P17096 107 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RFX3P48380 749 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC3A1Q07837 685 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PON2Q15165 354 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MYLK3Q32MK0 819 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SPATA22Q8NHS9 363 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CDC26Q8NHZ8 85 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DPF1Q92782 380 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC28A3Q9HAS3 691 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MRPS33Q9Y291 106 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 E7ESA3 106 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NTSP30990 170 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GALCP54803 685 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 C19orf57Q0VDD7 668 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PDZD11Q5EBL8 140 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CPXM2Q8N436 756 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MEIOBQ8N635 442 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 THAP6Q8TBB0 222 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM204Q9BSN7 226 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TMPRSS13Q9BYE2 586 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC6A17Q9H1V8 727 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CWH43Q9H720 699 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ABRACLQ9P1F3 81 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ASB1Q9Y576 335 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 N6AMT1Q9Y5N5 214 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms