RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 TLE2Q04725 743 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 TRNP1Q6NT89 227 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 TUBA1AQ71U36 451 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 AQP11Q8NBQ7 271 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 OR4C6Q8NH72 309 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 CNIH3Q8TBE1 160 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 RANBP9Q96S59 729 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 PDCD10Q9BUL8 212 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 TRMT61BQ9BVS5 477 aaKnown RBP11.14□□□□□ -0.63
RD3-201ENST00000367002 KCNH6Q9H252 994 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 ERVW-1Q9UQF0 538 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 RNF6Q9Y252 685 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
RD3-201ENST00000367002 H7C0S8 307 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 COCHO43405 550 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 ORC5O43913 435 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 SOX14O95416 240 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 JUNP05412 331 aaKnown RBP11.14□□□□□ -0.63
RD3-201ENST00000367002 PRSS56P0CW18 603 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 C7P10643 843 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 FDXRP22570 491 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 PIK3CBP42338 1070 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 BDKRB1P46663 353 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 OR1E2P47887 323 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 NCBP2P52298 156 aaKnown RBP eCLIP11.14□□□□□ -0.63
RD3-201ENST00000367002 TMBIM6P55061 237 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 ABRAXAS2Q15018 415 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 TSTQ16762 297 aaKnown RBP11.14□□□□□ -0.63
RD3-201ENST00000367002 FAM171BQ6P995 826 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 POMZP3Q6PJE2 187 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 MAMDC4Q6UXC1 1216 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 GET4Q7L5D6 327 aaPredicted RBP11.14□□□□□ -0.63
RD3-201ENST00000367002 FAM129CQ86XR2 697 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 SLC22A17Q8WUG5 538 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 TFGQ92734 400 aaPredicted RBP11.14□□□□□ -0.63
RD3-201ENST00000367002 PPP1R14AQ96A00 147 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 CRELD1Q96HD1 420 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 DLGAP4Q9Y2H0 992 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 PCDHGA7Q9Y5G6 932 aa11.14□□□□□ -0.63
RD3-201ENST00000367002 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 IQCMA0A1B0GVH7 501 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 APODP05090 189 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 PPP2R2BQ00005 443 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 GALNT1Q10472 559 aaPredicted RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 ATG9BQ674R7 924 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 FAM180AQ6UWF9 173 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 LRRTM3Q86VH5 581 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 IQCHQ86VS3 1027 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 GOLM1Q8NBJ4 401 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 RBM18Q96H35 190 aaKnown RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 LMLNQ96KR4 655 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 ALPK1Q96QP1 1244 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 CCM2Q9BSQ5 444 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 KLHL31Q9H511 634 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 NUP98P52948 1817 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 TLX2O43763 284 aaPredicted RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 BMP2P12643 396 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 ACP5P13686 325 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 HTR6P50406 440 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 STXBP1P61764 594 aaKnown RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 VMACQ2NL98 169 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 LCN8Q6JVE9 175 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 ZNF563Q8TA94 476 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 CAMK1GQ96NX5 476 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 HCN4Q9Y3Q4 1203 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 UPK3BL1B0FP48 263 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 UPK3BL2E5RIL1 263 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 LSM1O15116 133 aaKnown RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 EEDO75530 441 aaKnown RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 MPIP34949 423 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 GATMP50440 423 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 GMFBP60983 142 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 C22orf39Q6P5X5 142 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 KLHL35Q6PF15 583 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 SUSD1Q6UWL2 747 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 TMIGD2Q96BF3 282 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 PGAP3Q96FM1 320 aaPredicted RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 SDR39U1Q9NRG7 319 aaPredicted RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 EBF1Q9UH73 591 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 TAC3Q9UHF0 121 aa11.13□□□□□ -0.63
RD3-201ENST00000367002 CNOT11Q9UKZ1 510 aaKnown RBP11.13□□□□□ -0.63
RD3-201ENST00000367002 C6orf47O95873 294 aa11.12□□□□□ -0.63
RD3-201ENST00000367002 ITGB1P05556 798 aa11.12□□□□□ -0.63
RD3-201ENST00000367002 GALTP07902 379 aa11.12□□□□□ -0.63
RD3-201ENST00000367002 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
RD3-201ENST00000367002 CPN2P22792 545 aa11.12□□□□□ -0.63
RD3-201ENST00000367002 CCR8P51685 355 aa11.12□□□□□ -0.63
RD3-201ENST00000367002 CLCNKAP51800 687 aa11.12□□□□□ -0.63
RD3-201ENST00000367002 ZNF630Q2M218 657 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms