RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 FDXRP22570 491 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RGS4P49798 205 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PGGT1BP53609 377 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CSNK1G2P78368 415 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 DR1Q01658 176 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 AGTRAPQ6RW13 159 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TMEM205Q6UW68 189 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 KLHL7Q8IXQ5 586 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 IQCKQ8N0W5 287 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PDIK1LQ8N165 341 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ZADH2Q8N4Q0 377 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 GABPB2Q8TAK5 448 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PPP4R1Q8TF05 950 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PSMF1Q92530 271 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TM9SF4Q92544 642 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RERGQ96A58 199 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 C8orf44Q96CB5 159 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CAPZA3Q96KX2 299 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RUNDC3BQ96NL0 473 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SARGQ9BW04 601 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 DRC3Q9H069 523 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PCBD2Q9H0N5 130 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MKKSQ9NPJ1 570 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CORO1CQ9ULV4 474 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SAR1BQ9Y6B6 198 aa12.98□□□□□ -0.33
TNFRSF1A-202ENST00000366159 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 E7ESA3 106 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 I3L1I5 382 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FFAR3O14843 346 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 GPR42O15529 346 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TTI1O43156 1089 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PRPF4O43172 522 aaKnown RBP eCLIP12.97□□□□□ -0.335e-7■■■■□ 24.8
TNFRSF1A-202ENST00000366159 LCMT2O60294 686 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CBX6O95503 412 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 COX6A1P12074 109 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ACPPP15309 386 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ITGA8P53708 1063 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 GNG11P61952 73 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 RPS15AP62244 130 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SYT16Q17RD7 645 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 THEMIS2Q5TEJ8 643 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 AGAP7PQ5VUJ5 663 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LCTLQ6UWM7 567 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TMEM207Q6UWW9 146 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ZC3H7AQ8IWR0 971 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PRSS58Q8IYP2 241 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SHISA5Q8N114 240 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MYO1HQ8N1T3 1032 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CISD2Q8N5K1 135 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 OR4K1Q8NGD4 311 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 OR56A3Q8NH54 315 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LINGO1Q96FE5 620 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PDLIM5Q96HC4 596 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 THOC3Q96J01 351 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VPS50Q96JG6 964 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 AGAP4Q96P64 663 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 LMF1Q96S06 567 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NAPGQ99747 312 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 OLFM1Q99784 485 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 WDR77Q9BQA1 342 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MCMBPQ9BTE3 642 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ATG10Q9H0Y0 220 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ABCF3Q9NUQ8 709 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 C14orf105Q9NVL8 296 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 ASF1BQ9NVP2 202 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MOCS1Q9NZB8 636 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TRPC4Q9UBN4 977 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 IKZF3Q9UKT9 509 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PYCARDQ9ULZ3 195 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CHMP2BQ9UQN3 213 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 VWA7Q9Y334 891 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NAV2Q8IVL1 2488 aa12.97□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SPTAN1Q13813 2472 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 IGHV1-45A0A0A0MS14 117 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 H0YIG0 161 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CCDC188H7C350 402 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 PCDH17O14917 1159 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SEMA7AO75326 666 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 KLHL18O94889 574 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 BMP10O95393 424 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 CCND1P24385 295 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 SOX11P35716 441 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 EMP2P54851 167 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 IL2P60568 153 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 MRPL49Q13405 166 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NAE1Q13564 534 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 HIF1AQ16665 826 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 DUPD1Q68J44 220 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 FAM45BPQ6NSW5 357 aa12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 TMEM214Q6NUQ4 689 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-202ENST00000366159 NDUFAF7Q7L592 441 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms