RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TNFSF12O43508 249 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 QDPRP09417 244 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 SELEP16581 610 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 JAK1P23458 1154 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 RGS2P41220 211 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 SLC1A4P43007 532 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 LINC00315P59091 139 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 TRAP1Q12931 704 aaKnown RBP1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 CRYMQ14894 314 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 TMEM44Q2T9K0 475 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 GPR33Q49SQ1 333 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 C9orf129Q5T035 196 aaKnown RBP1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 C10orf62Q5T681 223 aaPredicted RBP1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 ATP1A1-AS1Q5TC04 95 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 KLHL35Q6PF15 583 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 ZNF600Q6ZNG1 722 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 C5orf24Q7Z6I8 188 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 MMD2Q8IY49 270 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 KIR2DL5AQ8N109 375 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 RNF175Q8N4F7 328 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 PIGBQ92521 554 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 ST6GALNAC6Q969X2 333 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 ZUFSPQ96AP4 578 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 ELSPBP1Q96BH3 223 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 DNAI2Q9GZS0 605 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 KLK11Q9UBX7 282 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 CORO1CQ9ULV4 474 aaPredicted RBP1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 NACAE9PAV3 2078 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 CDC42BPBQ9Y5S2 1711 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 MEGF6O75095 1541 aa1.2□□□□□ -2.22
RNU6-238P-201ENST00000363313 RNF123Q5XPI4 1314 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 FRMD3A2A2Y4 597 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 MYO1GB0I1T2 1018 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 SCO2O43819 266 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 SEMA4FO95754 770 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 IGHG1P01857 330 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 SMIM18P0DKX4 95 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 HAPLN1P10915 354 aaPredicted RBP1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 ATP1A3P13637 1013 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 MMP9P14780 707 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 HNRNPA2B1P22626 353 aaKnown RBP1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 GABRA5P31644 462 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 CRYBA2P53672 197 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 KRTAP12-4P60329 112 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 CYLC2Q14093 348 aaPredicted RBP1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 KIAA0040Q15053 153 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 MED22Q15528 200 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 POM121L1PQ3SYA9 428 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 ZNF658BQ4V348 819 aaPredicted RBP1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 TFDP3Q5H9I0 405 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 FGD3Q5JSP0 725 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 UBQLNLQ8IYU4 475 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 METTL21AQ8WXB1 218 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 FRAT1Q92837 279 aaPredicted RBP1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 MXD3Q9BW11 206 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 MUC13Q9H3R2 512 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 EGLN3Q9H6Z9 239 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 DPP3Q9NY33 737 aa1.19□□□□□ -2.22
RNU6-238P-201ENST00000363313 NPHP3Q7Z494 1330 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 hCG_38984A0A1B0GV85 526 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 A0A1W2PQ67 120 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 RRN3P2A6NIE6 340 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 PIP5K1CO60331 668 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 ECE2O60344 883 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 CYTIPO60759 359 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 OR2C1O95371 312 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 P0C879 139 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 IRF2P14316 349 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 GABRB1P18505 474 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 SUOXP51687 545 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 CASP6P55212 293 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 MLF2Q15773 248 aaPredicted RBP1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 KCTD19Q17RG1 926 aaPredicted RBP1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 ALDH1L2Q3SY69 923 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 FAM106AQ4KMX7 169 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 KIAA0930Q6ICG6 404 aaPredicted RBP1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 OR4A47Q6IF82 309 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 IRGCQ6NXR0 463 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 SLC24A5Q71RS6 500 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 ESX1Q8N693 406 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 NOA1Q8NC60 698 aaKnown RBP1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 OR2L5Q8NG80 312 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 GTSF1Q8WW33 167 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 RFFLQ8WZ73 363 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 SLAMF9Q96A28 289 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 NABP1Q96AH0 204 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 CMTM3Q96MX0 182 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 CHRDL1Q9BU40 450 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 MMP27Q9H306 513 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 Q9N2K0 584 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 DIAPH3Q9NSV4 1193 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 ZNF148Q9UQR1 794 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 RUSC2Q8N2Y8 1516 aa1.18□□□□□ -2.22
RNU6-238P-201ENST00000363313 NEMP2A6NFY4 417 aa1.17□□□□□ -2.22
RNU6-238P-201ENST00000363313 EPOPA6NHQ4 379 aa1.17□□□□□ -2.22
RNU6-238P-201ENST00000363313 E2F3O00716 465 aa1.17□□□□□ -2.22
RNU6-238P-201ENST00000363313 INPP4BO15327 924 aa1.17□□□□□ -2.22
RNU6-238P-201ENST00000363313 LRP3O75074 770 aa1.17□□□□□ -2.22
RNU6-238P-201ENST00000363313 ZNF253O75346 499 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms