RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RORCP51449 518 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TAS2R41P59536 307 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 GRIK2Q13002 908 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 SF1Q15637 639 aaKnown RBP13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 NOXRED1Q6NXP6 359 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 C16orf62Q7Z3J2 963 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 HMGN2P46Q86SG4 172 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 CDK20Q8IZL9 346 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 PELI3Q8N2H9 469 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 ZBED3Q96IU2 234 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-201ENST00000361866 TMEM246Q9BRR3 403 aa13.5□□□□□ -0.25
COL6A1-201ENST00000361866 A0A1W2PQ72 361 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 SEMA3DO95025 777 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 SBK3P0C264 359 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 PRG2P13727 222 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 DCKP27707 260 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TXNDC8Q6A555 127 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 DUS1LQ6P1R4 473 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 NARS2Q96I59 477 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 ASPNQ9BXN1 380 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MRPL9Q9BYD2 267 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MTIF3Q9H2K0 278 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 PAQR5Q9NXK6 330 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TLX2O43763 284 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 CH25HO95992 272 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 SSR2P43308 183 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 PCBP2Q15366 365 aaKnown RBP eCLIP13.49□□□□□ -0.255e-7■■□□□ 14
COL6A1-201ENST00000361866 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 COQ5Q5HYK3 327 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TMEM207Q6UWW9 146 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 Q6ZPB1 254 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 AP2M1Q96CW1 435 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 PGAP3Q96FM1 320 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MAELQ96JY0 434 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 POPDC3Q9HBV1 291 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 OSER1Q9NX31 292 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TBC1D14Q9P2M4 693 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 INTS6Q9UL03 887 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 CPSF4LA6NMK7 179 aaKnown RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 SCAMP1O15126 338 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 C1QAP02745 245 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 ALPLP05186 524 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 CDK6Q00534 326 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 SEMA3AQ14563 771 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 DPY19L1Q2PZI1 675 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 C9orf64Q5T6V5 341 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MACC1Q6ZN28 852 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 DSG4Q86SJ6 1040 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 BEND7Q8N7W2 519 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TCEANCQ8N8B7 351 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 DTX3Q8N9I9 347 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 C1orf74Q96LT6 269 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 FCRL4Q96PJ5 515 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TBX5Q99593 518 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MGLLQ99685 303 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 TUBB1Q9H4B7 451 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MCUBQ9NWR8 336 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 KIAA1522Q9P206 1035 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-201ENST00000361866 ING4Q9UNL4 249 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 MAPRE3Q9UPY8 281 aa13.49□□□□□ -0.25
COL6A1-201ENST00000361866 COL2A1P02458 1487 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-201ENST00000361866 KIAA0513O60268 411 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 NTSP30990 170 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 MAPK12P53778 367 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 SMIM11AP58511 58 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 MEF2AQ02078 507 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-201ENST00000361866 ARHGAP15Q53QZ3 475 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 LCN1P1Q5VSP4 162 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 TMEM220Q6QAJ8 160 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 SMARCD3Q6STE5 483 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 Q8N9G6 341 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-201ENST00000361866 RAB8BQ92930 207 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 ZFP3Q96NJ6 502 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 KCNH6Q9H252 994 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 ANKRA2Q9H9E1 313 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 ENPP5Q9UJA9 477 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 CLCA3PQ9Y6N3 262 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 ASCC3Q8N3C0 2202 aaKnown RBP13.48□□□□□ -0.25
COL6A1-201ENST00000361866 MAP1BP46821 2468 aaKnown RBP13.48□□□□□ -0.25
COL6A1-201ENST00000361866 HPRP00739 348 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 PFKLP17858 780 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 MAGEA12P43365 314 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 SPATS1Q496A3 300 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 C10orf62Q5T681 223 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-201ENST00000361866 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 GPRC5BQ9NZH0 403 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 POU2F3Q9UKI9 436 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 GJD2Q9UKL4 321 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 DNAJC25-GNG10A0A024R161 153 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 CNMDO75829 334 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 STATHP02808 62 aa13.48□□□□□ -0.25
COL6A1-201ENST00000361866 PIGAP37287 484 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms