RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 CCDC63Q8NA47 563 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 SLC24A4Q8NFF2 622 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 ALG14Q96F25 216 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 DTD2Q96FN9 168 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 MED30Q96HR3 178 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 IGSF21Q96ID5 467 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 SDCBP2Q9H190 292 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 TFB2MQ9H5Q4 396 aaKnown RBP4.47□□□□□ -1.69
RPL39-201ENST00000361575 MAD2L2Q9UI95 211 aa4.47□□□□□ -1.69
RPL39-201ENST00000361575 TRAV18A0A075B6X5 111 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 NPIPA3F8WFD2 350 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 CACNB4O00305 520 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 FPGTO14772 594 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ATP6V0E1O15342 81 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 RAD51DO75771 328 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 NTN1O95631 604 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 NR3C1P04150 777 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 LIFP15018 202 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ELAVL4P26378 380 aaKnown RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 MARK3P27448 753 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 CSTF2P33240 577 aaKnown RBP eCLIP4.46□□□□□ -1.7
RPL39-201ENST00000361575 FMO5P49326 533 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 HOXA1P49639 335 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 THBS3P49746 956 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 FKBP1BP68106 108 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 GFPT1Q06210 699 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 DMP1Q13316 513 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 PDE7AQ13946 482 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 KEAP1Q14145 624 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 SMC1AQ14683 1233 aaKnown RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 PDK1Q15118 436 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 EXT1Q16394 746 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ZC2HC1CQ53FD0 456 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 SLC35D3Q5M8T2 416 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 PDSS1Q5T2R2 415 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ETFRF1Q6IPR1 90 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 TTC27Q6P3X3 843 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ZCCHC12Q6PEW1 402 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 FOXL2NBQ6ZUU3 175 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 C5orf24Q7Z6I8 188 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 LAX1Q8IWV1 398 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 NEK11Q8NG66 645 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 PSMA8Q8TAA3 256 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 LMO3Q8TAP4 145 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 SLC13A3Q8WWT9 602 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 VOPP1Q96AW1 172 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 TBC1D31Q96DN5 1066 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 SENP5Q96HI0 755 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 ST6GAL2Q96JF0 529 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 RUNDC3BQ96NL0 473 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 DDX50Q9BQ39 737 aaKnown RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 C17orf62Q9BQA9 187 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ZPBPQ9BS86 351 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 CUEDC2Q9H467 287 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 MAGEF1Q9HAY2 307 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 OR6C2Q9NZP2 312 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 HMG20BQ9P0W2 317 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 CHKBQ9Y259 395 aa4.46□□□□□ -1.7
RPL39-201ENST00000361575 TDRKHQ9Y2W6 561 aaKnown RBP4.46□□□□□ -1.7
RPL39-201ENST00000361575 PLSCR5A0PG75 271 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 MTMR11A4FU01 709 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 INO80B-WBP1J3KQ70 363 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 TLR4O00206 839 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 PRPSAP2O60256 369 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 STAM2O75886 525 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 ALPPP05187 535 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 IGHV4-38-2P0DP08 117 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 ALPPL2P10696 532 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 LHCGRP22888 699 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 AHCYP23526 432 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 SRD5A2P31213 254 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 STXBP2Q15833 593 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 DNAJC21Q5F1R6 531 aaKnown RBP4.45□□□□□ -1.7
RPL39-201ENST00000361575 TECRLQ5HYJ1 363 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 NADSYN1Q6IA69 706 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 OR4C11Q6IEV9 310 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 UGT3A1Q6NUS8 523 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 FUT10Q6P4F1 479 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 CTR9Q6PD62 1173 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 MRPL43Q8N983 215 aaKnown RBP4.45□□□□□ -1.7
RPL39-201ENST00000361575 SLC26A7Q8TE54 656 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 NUDCD2Q8WVJ2 157 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 FCAMRQ8WWV6 532 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 PIK3R3Q92569 461 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 C4orf45Q96LM5 186 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 RUFY1Q96T51 708 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 RHNO1Q9BSD3 238 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 ZNF577Q9BSK1 485 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 TSPYL1Q9H0U9 437 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 ABCG8Q9H221 673 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 CARD9Q9H257 536 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 HSD3B7Q9H2F3 369 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 KCNMB3Q9NPA1 279 aa4.45□□□□□ -1.7
RPL39-201ENST00000361575 FAF1Q9UNN5 650 aaPredicted RBP4.45□□□□□ -1.7
RPL39-201ENST00000361575 PIN4Q9Y237 131 aaKnown RBP4.45□□□□□ -1.7
RPL39-201ENST00000361575 FOXA2Q9Y261 457 aaPredicted RBP4.45□□□□□ -1.7
RPL39-201ENST00000361575 R4GN57 208 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms