RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 IPPKQ9H8X2 491 aa13.25□□□□□ -0.29
NSMCE1-201ENST00000361439 DKK4Q9UBT3 224 aa13.25□□□□□ -0.29
NSMCE1-201ENST00000361439 PISDQ9UG56 409 aa13.25□□□□□ -0.29
NSMCE1-201ENST00000361439 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
NSMCE1-201ENST00000361439 ASB1Q9Y576 335 aa13.25□□□□□ -0.29
NSMCE1-201ENST00000361439 AP1M2Q9Y6Q5 423 aa13.25□□□□□ -0.29
NSMCE1-201ENST00000361439 NCOR2Q9Y618 2525 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 FITM1A5D6W6 292 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TRABD2BA6NFA1 517 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TMEM150CB9EJG8 249 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 E7EQ34 232 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 H3BMH7 237 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 BIRC5O15392 142 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TRIM13O60858 407 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TNFSF15O95150 251 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 SIX3O95343 332 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 OTCP00480 354 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 HBQ1P09105 142 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 HGFP14210 728 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 SERPINB1P30740 379 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 HNF4AP41235 474 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 ITGA1P56199 1179 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 YBX1P67809 324 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 REEP5Q00765 189 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 IRF8Q02556 426 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 KCNAB1Q14722 419 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 PCLAFQ15004 111 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 HIST2H2ACQ16777 129 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 FBXO48Q5FWF7 155 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 XKR6Q5GH73 641 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 CATSPEREQ5SY80 951 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 HIST2H2AA3Q6FI13 130 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 GOLGA7Q7Z5G4 137 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TMPRSS11BQ86T26 416 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 PPP4R1Q8TF05 950 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 RERGQ96A58 199 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TMEM237Q96Q45 408 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TRMOQ9BU70 441 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 NLNQ9BYT8 704 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 KCNK9Q9NPC2 374 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 THSD1Q9NS62 852 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 SLC17A7Q9P2U7 560 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 ADGRE2Q9UHX3 823 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 SH2B3Q9UQQ2 575 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 KLHL20Q9Y2M5 609 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 PCDHB3Q9Y5E6 796 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
NSMCE1-201ENST00000361439 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 HAT1O14929 419 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ZSCAN9O15535 394 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 PRAMEF10O60809 474 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 OR2B3O76000 313 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 SUPT7LO94864 414 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ITIH1P19827 911 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 HPDP32754 393 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 SERPINB5P36952 375 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 SCTRP47872 440 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 CCNG1P51959 295 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 MAPK10P53779 464 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ARSFP54793 590 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 CLCQ05315 142 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 GALNT1Q10472 559 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 LCP2Q13094 533 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 CHIT1Q13231 466 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 PWP1Q13610 501 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 DOC2AQ14183 400 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 GRM7Q14831 915 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 GPR19Q15760 415 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 FAM214AQ32MH5 1076 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 GGTA1PQ4G0N0 100 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 GARNL3Q5VVW2 1013 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 TMIGD1Q6UXZ0 262 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 MFSD9Q8NBP5 474 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 TRPV3Q8NET8 790 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 OR1L3Q8NH93 324 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 USP7Q93009 1102 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ATP6V1E2Q96A05 226 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ARL8AQ96BM9 186 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 REPS1Q96D71 796 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 CNDP1Q96KN2 507 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ZNF382Q96SR6 550 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 GEMIN8Q9NWZ8 242 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 ZFP69BQ9UJL9 534 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 SRPK3Q9UPE1 567 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 AK5Q9Y6K8 562 aa13.23□□□□□ -0.29
NSMCE1-201ENST00000361439 TMEM120BA0PK00 339 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 C9orf172C9J069 976 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 H0YGG7 62 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 H0YIV9 168 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 OR1F1O43749 312 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 SNUPNO95149 360 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 CLDN9O95484 217 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 BPGMP07738 259 aa13.22□□□□□ -0.29
NSMCE1-201ENST00000361439 ETV5P41161 510 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms