RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MSLNLQ96KJ4 702 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 COMMD3-BMI1R4GMX3 469 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SNUPNO95149 360 aaKnown RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 OAZ2O95190 189 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 F2P00734 622 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 HNF1BP35680 557 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 AGTR2P50052 363 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 AP2S1P53680 142 aaPredicted RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ADGRD1Q6QNK2 874 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 TMEM203Q969S6 136 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC39A3Q9BRY0 314 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 GATA5Q9BWX5 397 aaPredicted RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 LMAN1LQ9HAT1 526 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 UPB1Q9UBR1 384 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 EPCAMP16422 314 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 FAUP35544 74 aaKnown RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 PUDPQ08623 228 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 GPR17Q13304 367 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 ABCA11PQ4W5N1 156 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 CEACAM20Q6UY09 585 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 PHF12Q96QT6 1004 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 TMED9Q9BVK6 235 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 AMBNQ9NP70 447 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 PRPF19Q9UMS4 504 aaKnown RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 IRGMA1A4Y4 181 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SMIM30A4D0T7 59 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 TGDSO95455 350 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 THRBP10828 461 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 UNGP13051 313 aaPredicted RBP19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 BCAP31P51572 246 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SEZ6LQ9BYH1 1024 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SMOC2Q9H3U7 446 aa19.72■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLIT2O94813 1529 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF142P52746 1687 aaPredicted RBP19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ANGPTL1O95841 491 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ITGB1P05556 798 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC39A4Q6P5W5 647 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF676Q8N7Q3 588 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC5A11Q8WWX8 675 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 IL4I1Q96RQ9 567 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF717Q9BY31 904 aaPredicted RBP19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 DZANK1Q9NVP4 752 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 C6orf47O95873 294 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 CRTC2Q53ET0 693 aaPredicted RBP19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 RAET1LQ5VY80 246 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 SHISA6Q6ZSJ9 500 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 IL17FQ96PD4 163 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 FCRL5Q96RD9 977 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 PCDHAC1Q9H158 963 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 PRTFDC1Q9NRG1 225 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 HSD17B2P37059 387 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ARFRP1Q13795 201 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.71■□□□□ 0.751e-8■□□□□ 10.6
CDC42BPB-201ENST00000361246 ZNF852Q6ZMS4 543 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC16A5O15375 505 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 HCKP08631 526 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 CDKL1Q00532 357 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 TMEM225Q6GV28 225 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 C12orf40Q86WS4 652 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 CNTN6Q9UQ52 1028 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 GRIP1Q9Y3R0 1128 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 CIB4A0PJX0 185 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 XKP51811 444 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 HERVK_113P63132 956 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 LASP1Q14847 261 aaKnown RBP19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 SLC35F1Q5T1Q4 408 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 OR4F6Q8NGB9 312 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 ERVK-6Q9BXR3 956 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 IRF2BPLQ9H1B7 796 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 Q9N2J8 555 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 PNPLA3Q9NST1 481 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 PLEKHA6Q9Y2H5 1048 aa19.71■□□□□ 0.75
CDC42BPB-201ENST00000361246 K7ERQ8 282 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 SLC30A4O14863 429 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 SNTA1Q13424 505 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 AAGABQ6PD74 315 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 ORAI3Q9BRQ5 295 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 J3QLW9 94 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 ZNF19P17023 458 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 PNLIPRP1P54315 467 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 ZNF805Q5CZA5 627 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 RFKQ969G6 155 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 CCNB1IP1Q9NPC3 277 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 FARSBQ9NSD9 589 aaKnown RBP19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 CORO1CQ9ULV4 474 aaPredicted RBP19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 SNX7Q9UNH6 387 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 C2orf74A8MZ97 194 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 APCDD1Q8J025 514 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 OR9A1PQ8NGU1 263 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 RASSF5Q8WWW0 418 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 IGSF9Q9P2J2 1179 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 SOX14O95416 240 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 PLATP00750 562 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 SYPP08247 313 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 PRPS2P11908 318 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 PDSS1Q5T2R2 415 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 FAM180BQ6P0A1 224 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 MCFD2Q8NI22 146 aa19.7■□□□□ 0.74
CDC42BPB-201ENST00000361246 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms