RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PNMA8BQ9ULN7 279 aaPredicted RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 INVSQ9Y283 1065 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 KNL1Q8NG31 2342 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 BDP1A6H8Y1 2624 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 IFRD1O00458 451 aaPredicted RBP12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 CLOCKO15516 846 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 GGT5P36269 586 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 CCSMST1Q4G0I0 132 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 LRRC70Q7Z2Q7 622 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 DHRSXQ8N5I4 330 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 DNAJB14Q8TBM8 379 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 FBXL8Q96CD0 374 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TIMM29Q9BSF4 260 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 BRINP2Q9C0B6 783 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 ACSL5Q9ULC5 683 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 PLEKHM1Q9Y4G2 1056 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 ST14Q9Y5Y6 855 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 ABCA7Q8IZY2 2146 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TECTAO75443 2155 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 PRAMEF26H0Y7S4 382 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TOR1BO14657 336 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 PI15O43692 258 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TPST1O60507 370 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 LDLRP01130 860 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 RPN2P04844 631 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC35G4P0C7Q5 338 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 GDF5P43026 501 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 POLR2JP52435 117 aaKnown RBP12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 DIO3P55073 304 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 YPEL5P62699 121 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 ERVK-8P63133 956 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 NFATC4Q14934 902 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 METRNLQ641Q3 311 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 ABRAXAS1Q6UWZ7 409 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 UNC5DQ6UXZ4 953 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 PDZD3Q86UT5 571 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 IFNEQ86WN2 208 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 CROCCP3Q8IVE0 287 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TMEM145Q8NBT3 493 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 FBXO15Q8NCQ5 510 aaPredicted RBP12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 GAB3Q8WWW8 586 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 WDR92Q96MX6 357 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 SIT1Q9Y3P8 196 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 GPSM3Q9Y4H4 160 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TIMM22Q9Y584 194 aa12.72□□□□□ -0.37
SQSTM1-201ENST00000360718 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 LRP4O75096 1905 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 FAM234BA2RU67 622 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 FAM149AA5PLN7 773 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 NDUFS2O75306 463 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 WDR47O94967 919 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 C1orf105O95561 183 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 ACP5P13686 325 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 HTR1EP28566 365 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 PRDX3P30048 256 aaKnown RBP12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 BDKRB1P46663 353 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 XKR7Q5GH72 579 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 MILR1Q7Z6M3 343 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 SYVN1Q86TM6 617 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 DEFB119Q8N690 84 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 CYGBQ8WWM9 190 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 ORAI3Q9BRQ5 295 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 BDH2Q9BUT1 245 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 OR52A5Q9H2C5 316 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 OSGEPL1Q9H4B0 414 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 OAZ3Q9UMX2 235 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 ASF1AQ9Y294 204 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 GMEB1Q9Y692 573 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 LAMA1P25391 3075 aa12.71□□□□□ -0.37
SQSTM1-201ENST00000360718 C9JVG2 144 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 DLGAP1O14490 977 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 CAPGP40121 348 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 GNPDA1P46926 289 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 CDH15P55291 814 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 PFN3P60673 137 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 ZXDAP98168 799 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 DMPKQ09013 629 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 PTCHD3Q3KNS1 767 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 PYCR3Q53H96 274 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 ENPP7Q6UWV6 458 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 PATL1Q86TB9 770 aaKnown RBP12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 CLVS1Q8IUQ0 354 aaPredicted RBP12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 CHCHD4Q8N4Q1 142 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 CAMKK1Q8N5S9 505 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 OR52B6Q8NGF0 335 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 PDXPQ96GD0 296 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 IRAK4Q9NWZ3 460 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 ZNF225Q9UK10 706 aa12.71□□□□□ -0.38
SQSTM1-201ENST00000360718 TCRBV5S2A0A599 114 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 PRSS38A1L453 326 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 TRIM64A6NGJ6 449 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 K7ESF4 209 aa12.7□□□□□ -0.38
SQSTM1-201ENST00000360718 ACOX3O15254 700 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms