RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 CD22P20273 847 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 CYP4F8P98187 520 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 C22orf39Q6P5X5 142 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 NEK10Q6ZWH5 1172 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 NDNFQ8TB73 568 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 WDR20Q8TBZ3 569 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 WDR12Q9GZL7 423 aaKnown RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 SELENONQ9NZV5 590 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 VPS29Q9UBQ0 182 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 DOLKQ9UPQ8 538 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 SAMHD1Q9Y3Z3 626 aaKnown RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 CXorf51AA0A1B0GTR3 108 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 UGDHO60701 494 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 EPHA2P29317 976 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 VEZF1Q14119 521 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 CLCA4Q14CN2 919 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 IQCCQ4KMZ1 466 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 KIAA1614Q5VZ46 1190 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 FAHD1Q6P587 224 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 CLECL1Q8IZS7 167 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 SYNPOQ8N3V7 929 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 S100ZQ8WXG8 99 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 ZNF300Q96RE9 604 aaPredicted RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 DPH2Q9BQC3 489 aaPredicted RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 BBS2Q9BXC9 721 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 KRT84Q9NSB2 600 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
GYPC-202ENST00000356887 B4GALT6Q9UBX8 382 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 HS3ST2Q9Y278 367 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 PCDHB11Q9Y5F2 797 aa17.09■□□□□ 0.33
GYPC-202ENST00000356887 M0R3G1 203 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 KPNA4O00629 521 aaPredicted RBP17.08■□□□□ 0.33
GYPC-202ENST00000356887 KPNA5O15131 536 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 RGS10O43665 173 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 FKBP9O95302 570 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 LAMP1P11279 417 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 LBX1P52954 281 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 ITGA1P56199 1179 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 SLC7A9P82251 487 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 IRF8Q02556 426 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 SMN1Q16637 294 aaKnown RBP17.08■□□□□ 0.33
GYPC-202ENST00000356887 THOC7Q6I9Y2 204 aaKnown RBP17.08■□□□□ 0.33
GYPC-202ENST00000356887 PDE12Q6L8Q7 609 aaKnown RBP17.08■□□□□ 0.33
GYPC-202ENST00000356887 GAREM2Q75VX8 874 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 CCDC71Q8IV32 467 aaPredicted RBP17.08■□□□□ 0.33
GYPC-202ENST00000356887 SVOPQ8N4V2 548 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 ZNF540Q8NDQ6 660 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 AUTS2Q8WXX7 1259 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 ALPK1Q96QP1 1244 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 PITX2Q99697 317 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 MYOCQ99972 504 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 NEURL2Q9BR09 285 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 RHNO1Q9BSD3 238 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 MROQ9BYG7 248 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 SIRT5Q9NXA8 310 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 CD84Q9UIB8 345 aa17.08■□□□□ 0.33
GYPC-202ENST00000356887 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.33
GYPC-202ENST00000356887 MICAL3Q7RTP6 2002 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 TOR1BO14657 336 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 DPM1O60762 260 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
GYPC-202ENST00000356887 CKMP06732 381 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 GABRR2P28476 465 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 CCL23P55773 120 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 MVKQ03426 396 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 OXA1LQ15070 435 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 CYP2A13Q16696 494 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 DGUOKQ16854 277 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 FBXO46Q6PJ61 603 aaPredicted RBP17.08■□□□□ 0.32
GYPC-202ENST00000356887 DPY19L3Q6ZPD9 716 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 P2RY8Q86VZ1 359 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 SLC39A11Q8N1S5 342 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 ZFP90Q8TF47 636 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 C11orf24Q96F05 449 aaPredicted RBP17.08■□□□□ 0.32
GYPC-202ENST00000356887 C7orf34Q96L11 122 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 CHST8Q9H2A9 424 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 ARMC7Q9H6L4 198 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 ZDHHC6Q9H6R6 413 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 REEP1Q9H902 201 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 CCNB1IP1Q9NPC3 277 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 ACOT13Q9NPJ3 140 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 BTBD3Q9Y2F9 522 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 PMF1-BGLAPU3KQ54 211 aa17.08■□□□□ 0.32
GYPC-202ENST00000356887 NUP214P35658 2090 aaPredicted RBP17.07■□□□□ 0.32
GYPC-202ENST00000356887 HTR3EA5X5Y0 456 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 SGTAO43765 313 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 FAM20BO75063 409 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 SERPINB7O75635 380 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 NADKO95544 446 aaPredicted RBP17.07■□□□□ 0.32
GYPC-202ENST00000356887 CDH3P22223 829 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 VBP1P61758 197 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 LSM3P62310 102 aaKnown RBP17.07■□□□□ 0.32
GYPC-202ENST00000356887 RPP38P78345 283 aaKnown RBP17.07■□□□□ 0.32
GYPC-202ENST00000356887 KCNC3Q14003 757 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 TRIM16LQ309B1 348 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 XKR6Q5GH73 641 aa17.07■□□□□ 0.32
GYPC-202ENST00000356887 LRRC73Q5JTD7 316 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms