RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SMAD9O15198 467 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 BCAS1O75363 584 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 FAM163BP0C2L3 166 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 OR4D2P58180 307 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 RPL26P61254 145 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 WDR45BQ5MNZ6 344 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SLC37A3Q8NCC5 494 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 ARRDC2Q8TBH0 407 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SIAEQ9HAT2 523 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 FARSBQ9NSD9 589 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TRAV19A0A0A6YYK7 116 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 C7orf72A4D263 438 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 UBFD1O14562 309 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 FPGTO14772 594 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SMAD6O43541 496 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 STC2O76061 302 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TMBIM6P55061 237 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 CSTF1Q05048 431 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 PGM2L1Q6PCE3 622 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TMEM207Q6UWW9 146 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 GOLGA7Q7Z5G4 137 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 CLEC14AQ86T13 490 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TSPAN33Q86UF1 283 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 RETREG3Q86VR2 466 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 APCDD1Q8J025 514 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 METTL25Q8N6Q8 603 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 MINDY2Q8NBR6 621 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SORCS1Q8WY21 1168 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 CERS4Q9HA82 394 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 IL1RAPQ9NPH3 570 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 RAD18Q9NS91 495 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 KLHL28Q9NXS3 571 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TBC1D24Q9ULP9 559 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 A0A1W2PP18 115 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 PLOD2O00469 737 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 TRBC1P01850 177 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 ALDOCP09972 364 aaKnown RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SLC2A2P11168 524 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 NUP62P37198 522 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-202ENST00000355815 OLFML2AQ68BL7 652 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 PLEKHG7Q6ZR37 379 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 CADM2Q8N3J6 435 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SLC30A3Q99726 388 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 C1QTNF1Q9BXJ1 281 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 STOML2Q9UJZ1 356 aa13.67□□□□□ -0.22
SREBF1-202ENST00000355815 NINQ8N4C6 2090 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 TRAV6A0A075B6T7 132 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ERAL1O75616 437 aaKnown RBP13.66□□□□□ -0.22
SREBF1-202ENST00000355815 NR2F1P10589 423 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 OXTRP30559 389 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 SPAM1P38567 509 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 RTN4RL1Q86UN2 441 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-202ENST00000355815 CFL2Q9Y281 166 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 TRIP12Q14669 1992 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-202ENST00000355815 A0A0G2JPF8 293 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ZNF840PA6NDX5 716 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 HNRNPCL3B7ZW38 293 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 OAZ2O95190 189 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 CLDN9O95484 217 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 HNRNPCL4P0DMR1 293 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ITGA3P26006 1051 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 PLA2G16P53816 162 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 DNAJB13P59910 316 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 PCDH1Q08174 1060 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 GTDC1Q4AE62 458 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ARHGAP15Q53QZ3 475 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.66□□□□□ -0.222e-15■■■□□ 19.1
SREBF1-202ENST00000355815 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ANKRA2Q9H9E1 313 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 RP1L1Q8IWN7 2480 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-202ENST00000355815 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 SCELO95171 688 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 DNTTP04053 509 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 FUCA1P04066 466 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 SDC2P34741 201 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 HLCSP50747 726 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ZNF81P51508 661 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 DSC3Q14574 896 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 ABRAXAS2Q15018 415 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 FUBP1Q96AE4 644 aaKnown RBP13.66□□□□□ -0.22
SREBF1-202ENST00000355815 BBS4Q96RK4 519 aa13.66□□□□□ -0.22
SREBF1-202ENST00000355815 A0A0G2JN53 185 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 SLC30A4O14863 429 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 INPPL1O15357 1258 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 DYRK3O43781 588 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 OR2B3O76000 313 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 CDRT1O95170 752 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 CATP04040 527 aaKnown RBP13.65□□□□□ -0.22
SREBF1-202ENST00000355815 CYP27C1Q4G0S4 372 aa13.65□□□□□ -0.22
SREBF1-202ENST00000355815 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms