RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 MIB2Q96AX9 1013 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 ELMO2Q96JJ3 720 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 RPL10LQ96L21 214 aaKnown RBP6.77□□□□□ -1.33
VPS13A-201ENST00000355766 GPR78Q96P69 363 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 VPS35Q96QK1 796 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 ZSCAN5AQ9BUG6 496 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 BOCQ9BWV1 1114 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 TSSK1BQ9BXA7 367 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 TRIM55Q9BYV6 548 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 SLC13A1Q9BZW2 595 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 STRADBQ9C0K7 418 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 DERL2Q9GZP9 239 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 P2RY12Q9H244 342 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 TFB2MQ9H5Q4 396 aaKnown RBP6.77□□□□□ -1.33
VPS13A-201ENST00000355766 OXSMQ9NWU1 459 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 PKD2L2Q9NZM6 624 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 MARCH4Q9P2E8 410 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-201ENST00000355766 SLC17A6Q9P2U8 582 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 GULP1Q9UBP9 304 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 PISDQ9UG56 409 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 GNPTGQ9UJJ9 305 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-201ENST00000355766 ACTL7AQ9Y615 435 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 USH1CQ9Y6N9 552 aa6.77□□□□□ -1.33
VPS13A-201ENST00000355766 PRAMEF33A0A0G2JMD5 474 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 SPTY2D1-AS1A0A0U1RR47 76 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 KLHL33A6NCF5 533 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 NPIPB15A6NHN6 443 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 G3V2L1 256 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TMX2-CTNND1H3BSU7 103 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 KPNA5O15131 536 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 NPHS1O60500 1241 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PRAMEF10O60809 474 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 KIAA0754O94854 1291 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 HAUS5O94927 633 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 AP2A2O94973 939 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PIGNO95427 931 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PRKCGP05129 697 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 UGT2B4P06133 528 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 JMJD7P0C870 316 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CBSLP0DN79 551 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 MYL2P10916 166 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ENO3P13929 434 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PKMP14618 531 aaKnown RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ATP5F1P24539 256 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ACRV1P26436 265 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TEAD1P28347 426 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CCKBRP32239 447 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CBSP35520 551 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 MMP12P39900 470 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 NSG1P42857 185 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 IRX1P78414 480 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TMPRSS15P98073 1019 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 BST1Q10588 318 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PEX6Q13608 980 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ARHGEF7Q14155 803 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TBCCQ15814 346 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TTLL9Q3SXZ7 439 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ACCSLQ4AC99 568 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TECRLQ5HYJ1 363 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 LIPMQ5VYY2 423 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 LRRC66Q68CR7 880 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CNSTQ6PJW8 725 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 C6orf89Q6UWU4 347 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 Q6ZSR6 202 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 OTOAQ7RTW8 1153 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ZFAND4Q86XD8 727 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CRLF3Q8IUI8 442 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 WDR75Q8IWA0 830 aaKnown RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TRAM1L1Q8N609 369 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PAF1Q8N7H5 531 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CCDC63Q8NA47 563 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PPP1R14CQ8TAE6 165 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 LMX1AQ8TE12 382 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 KIAA1191Q96A73 305 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PEX11GQ96HA9 241 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 FAR2Q96K12 515 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 BIRC8Q96P09 236 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PANX3Q96QZ0 392 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 KLF6Q99612 283 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 PAIP2Q9BPZ3 127 aaKnown RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 C1QTNF3Q9BXJ4 246 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CLPBQ9H078 707 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 WWP1Q9H0M0 922 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ZDHHC6Q9H6R6 413 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 IL26Q9NPH9 171 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 FBXO6Q9NRD1 293 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 IL1RAPL1Q9NZN1 696 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 FOXJ2Q9P0K8 574 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 TMEM216Q9P0N5 145 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 ZFR2Q9UPR6 939 aaKnown RBP6.76□□□□□ -1.33
VPS13A-201ENST00000355766 STK38LQ9Y2H1 464 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 LOXL2Q9Y4K0 774 aa6.76□□□□□ -1.33
VPS13A-201ENST00000355766 CSMD1Q96PZ7 3565 aa6.75□□□□□ -1.33
VPS13A-201ENST00000355766 CREBBPQ92793 2442 aa6.75□□□□□ -1.33
VPS13A-201ENST00000355766 FOXO6A8MYZ6 492 aa6.75□□□□□ -1.33
VPS13A-201ENST00000355766 GPR89AB7ZAQ6 455 aa6.75□□□□□ -1.33
VPS13A-201ENST00000355766 GOLGA8TH3BQL2 631 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms