RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 APOLD1Q96LR9 279 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 ORAI3Q9BRQ5 295 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 FZD3Q9NPG1 666 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 SLAMF8Q9P0V8 285 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 MCM8Q9UJA3 840 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 PACSIN3Q9UKS6 424 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 CNOT11Q9UKZ1 510 aaKnown RBP16.56■□□□□ 0.24
VPS13B-201ENST00000355155 SLC31A1O15431 190 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 UMPSP11172 480 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 HTR1BP28222 390 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 GZMMP51124 257 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 RPS13P62277 151 aaKnown RBP16.56■□□□□ 0.24
VPS13B-201ENST00000355155 CAPRIN1Q14444 709 aaKnown RBP16.56■□□□□ 0.24
VPS13B-201ENST00000355155 UGT8Q16880 541 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 IKBIPQ70UQ0 350 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 IL17FQ96PD4 163 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 CPPED1Q9BRF8 314 aaPredicted RBP16.56■□□□□ 0.24
VPS13B-201ENST00000355155 SPNS1Q9H2V7 528 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 VCX3BQ9H321 246 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 MYNNQ9NPC7 610 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 BTNL2Q9UIR0 455 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 SNX13Q9Y5W8 968 aa16.56■□□□□ 0.24
VPS13B-201ENST00000355155 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 NVLO15381 856 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 ZCCHC18P0CG32 403 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 CDH1P12830 882 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 CCR8P51685 355 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 LIPEQ05469 1076 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 ACSM2AQ08AH3 577 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 ACSM2BQ68CK6 577 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 GJD3Q8N144 294 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 SLCO4A1Q96BD0 722 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 FERD3LQ96RJ6 166 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 AIF1LQ9BQI0 150 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 SLC25A37Q9NYZ2 338 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 ICKQ9UPZ9 632 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 MRPS17Q9Y2R5 130 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 PCDHB11Q9Y5F2 797 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 SCAMP2O15127 329 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 ZNF217O75362 1048 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 TBX6O95947 436 aaPredicted RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 MAT2AP31153 395 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 S100A3P33764 101 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 RPL3P39023 403 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 PRDX1Q06830 199 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 TPRG1LQ5T0D9 272 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 TMIGD1Q6UXZ0 262 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 TMEM102Q8N9M5 508 aaPredicted RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 PCDHAC1Q9H158 963 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 CCM2LQ9NUG4 571 aaPredicted RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 KLF15Q9UIH9 416 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 ADAM29Q9UKF5 820 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 KLK4Q9Y5K2 254 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 COLEC10Q9Y6Z7 277 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 CCNDBP1O95273 360 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 AASDHQ4L235 1098 aaPredicted RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 OR2A1Q8NGT9 310 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 GOT1L1Q8NHS2 421 aaPredicted RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 OR52E6Q96RD3 313 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 NELL2Q99435 816 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 MTERF1Q99551 399 aaKnown RBP16.55■□□□□ 0.24
VPS13B-201ENST00000355155 VAPAQ9P0L0 249 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 KCNK6Q9Y257 313 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 PLEKHM1Q9Y4G2 1056 aa16.55■□□□□ 0.24
VPS13B-201ENST00000355155 CEP290O15078 2479 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 H0YJX3 145 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 GPIP06744 558 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 IL1RNP18510 177 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 ATP6V1B2P21281 511 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 ATP6V1C1P21283 382 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 ICE2Q659A1 982 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 RNF175Q8N4F7 328 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 FAM156AQ8NDB6 213 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 TNIP2Q8NFZ5 429 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 TTLQ8NG68 377 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 GPBAR1Q8TDU6 330 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 MS4A8Q9BY19 250 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 GORASP2Q9H8Y8 452 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 MAGEL2Q9UJ55 1249 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 FAM220BPB1ANY3 271 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 HOXB6P17509 224 aaKnown RBP16.54■□□□□ 0.24
VPS13B-201ENST00000355155 RABL3Q5HYI8 236 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 ARMCX6Q7L4S7 300 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 NRROSQ86YC3 692 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 SYT12Q8IV01 421 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 PGBD3Q8N328 593 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 C1orf52Q8N6N3 182 aaKnown RBP16.54■□□□□ 0.24
VPS13B-201ENST00000355155 RNF148Q8N7C7 305 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 CATSPER1Q8NEC5 780 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 OR52E1Q8NGJ3 308 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 ZNF583Q96ND8 569 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 CDX2Q99626 313 aaPredicted RBP16.54■□□□□ 0.24
VPS13B-201ENST00000355155 TACO1Q9BSH4 297 aaKnown RBP16.54■□□□□ 0.24
VPS13B-201ENST00000355155 BHLHE41Q9C0J9 482 aaPredicted RBP16.54■□□□□ 0.24
VPS13B-201ENST00000355155 CARS2Q9HA77 564 aaKnown RBP16.54■□□□□ 0.24
VPS13B-201ENST00000355155 LTB4R2Q9NPC1 389 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 CIDEBQ9UHD4 219 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 PLAGL1Q9UM63 463 aa16.54■□□□□ 0.24
VPS13B-201ENST00000355155 TDRKHQ9Y2W6 561 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms