RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 COX6A1P12074 109 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ALOX15P16050 662 aaPredicted RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 ABOP16442 354 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 FDXRP22570 491 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 S100A1P23297 94 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 GCGRP47871 477 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CLCN2P51788 898 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ARPC4P59998 168 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 RPA4Q13156 261 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 KIR2DS3Q14952 304 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 TAF11Q15544 211 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 TAF1AQ15573 450 aaPredicted RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 GSTA3Q16772 222 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 LONRF1Q17RB8 773 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 SYTL3Q4VX76 610 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 CFAP157Q5JU67 520 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ABHD17BQ5VST6 288 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 PACS1Q6VY07 963 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 NEK10Q6ZWH5 1172 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 TAS2R42Q7RTR8 314 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 PID1Q7Z2X4 250 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 EXOC3L1Q86VI1 746 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 LMNTD1Q8N9Z9 388 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 NOA1Q8NC60 698 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 OR13C4Q8NGS5 318 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 STT3BQ8TCJ2 826 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 HEXDCQ8WVB3 486 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 TFB1MQ8WVM0 346 aaKnown RBP10.67□□□□□ -0.7
RTN3-204ENST00000354497 SDCCAG3Q96C92 435 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ATP6V1G3Q96LB4 118 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 SELENOSQ9BQE4 189 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 APOL2Q9BQE5 337 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 HSD3B7Q9H2F3 369 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 ZNF304Q9HCX3 659 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 OR6C2Q9NZP2 312 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 POLG2Q9UHN1 485 aa10.67□□□□□ -0.7
RTN3-204ENST00000354497 PCNX1Q96RV3 2341 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 DOCK10Q96BY6 2186 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 NPIPA5E9PKD4 350 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 FFAR3O14843 346 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 GPR42O15529 346 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 MLYCDO95822 493 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ZGLP1P0C6A0 271 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ITGAMP11215 1152 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 GNAZP19086 355 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 FBLP22087 321 aaKnown RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 VSX2P58304 361 aaPredicted RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 XIAPP98170 497 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ALDH6A1Q02252 535 aaKnown RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 MESDQ14696 234 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ZNF766Q5HY98 468 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ZC3H12BQ5HYM0 836 aaKnown RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 TCTE1Q5JU00 501 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 NAPRTQ6XQN6 538 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 C3P1Q6ZMU1 363 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 SNX20Q7Z614 316 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 SPPL2CQ8IUH8 684 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 CLDN19Q8N6F1 224 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ELMO1Q92556 727 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 NRGNQ92686 78 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 FCRL5Q96RD9 977 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 ENKD1Q9H0I2 346 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 GSX1Q9H4S2 264 aaPredicted RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 ZDHHC3Q9NYG2 299 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 SAE1Q9UBE0 346 aaPredicted RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 ZNF282Q9UDV7 671 aaPredicted RBP10.66□□□□□ -0.7
RTN3-204ENST00000354497 NPIPA1Q9UND3 350 aa10.66□□□□□ -0.7
RTN3-204ENST00000354497 A0A087X0T9 212 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 ONECUT2O95948 504 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 HEXBP07686 556 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 FAM228BP0C875 321 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 PRSS56P0CW18 603 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 TPBGLP0DKB5 382 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 NQO1P15559 274 aaKnown RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 MC4RP32245 332 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 CDKN1CP49918 316 aaPredicted RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 EMP2P54851 167 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 CSE1LP55060 971 aaKnown RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 TUBA4AP68366 448 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 GSTM4Q03013 218 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 CACNG1Q06432 222 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 WASHC5Q12768 1159 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 OLIG2Q13516 323 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 PPP1R7Q15435 360 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 FAM214AQ32MH5 1076 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 YOD1Q5VVQ6 348 aaPredicted RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 NEPROQ6NW34 567 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 ALKBH5Q6P6C2 394 aaKnown RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 SERPINA9Q86WD7 417 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 TMTC1Q8IUR5 882 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 TBC1D21Q8IYX1 336 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 ZNF567Q8N184 647 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 ANKS4BQ8N8V4 417 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 DNAAF3Q8N9W5 541 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 CHDHQ8NE62 594 aaPredicted RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 GPR137Q96N19 417 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 PRR14Q9BWN1 585 aa10.65□□□□□ -0.7
RTN3-204ENST00000354497 CNOT10Q9H9A5 744 aaKnown RBP10.65□□□□□ -0.7
RTN3-204ENST00000354497 KLHL1Q9NR64 748 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms