RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF33AQ06730 810 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 ABHD18Q0P651 414 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 HNRNPA0Q13151 305 aaKnown RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 PAN2Q504Q3 1202 aaKnown RBP7.4□□□□□ -1.22
BRCA1-201ENST00000352993 PTCHD4Q6ZW05 846 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 GPR65Q8IYL9 337 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 B3GNT7Q8NFL0 401 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 BRSK1Q8TDC3 778 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 IL4I1Q96RQ9 567 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 KATNAL1Q9BW62 490 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 ELOVL6Q9H5J4 265 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 CRTAC1Q9NQ79 661 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 COMMD3Q9UBI1 195 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
BRCA1-201ENST00000352993 COL4A5P29400 1685 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 MYLKQ15746 1914 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 E9PAM4 449 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 GPR182O15218 404 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 AOC2O75106 756 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 OPN1SWP03999 348 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 LGALS2P05162 132 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 HAPLN1P10915 354 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-201ENST00000352993 TNFRSF1BP20333 461 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 IL32P24001 234 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 KDELR2P33947 212 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 GPC1P35052 558 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 CDKN2CP42773 168 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 CDH12P55289 794 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 SPIBQ01892 262 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 HYAL2Q12891 473 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 TTLL4Q14679 1199 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 STK11Q15831 433 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.4□□□□□ -1.23
BRCA1-201ENST00000352993 OR4F3Q6IEY1 312 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 MZT2BQ6NZ67 158 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 TRIM69Q86WT6 500 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 TRMT61AQ96FX7 289 aaKnown RBP7.4□□□□□ -1.23
BRCA1-201ENST00000352993 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 SPATA9Q9BWV2 254 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 NFKBIZQ9BYH8 718 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 B3GNT4Q9C0J1 378 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 SRRQ9GZT4 340 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 NSUN3Q9H649 340 aaKnown RBP7.4□□□□□ -1.23
BRCA1-201ENST00000352993 C12orf10Q9HB07 376 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 AFF4Q9UHB7 1163 aaKnown RBP7.4□□□□□ -1.23
BRCA1-201ENST00000352993 MAPRE3Q9UPY8 281 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 DERAQ9Y315 318 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 KLK4Q9Y5K2 254 aa7.4□□□□□ -1.23
BRCA1-201ENST00000352993 TEX51A0A1B0GUA7 166 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 UPK3BL1B0FP48 263 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 HNRNPCL2B2RXH8 293 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 C19orf81C9J6K1 198 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 UPK3BL2E5RIL1 263 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 WISP3O95389 354 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ESR1P03372 595 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 HMBSP08397 361 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 PKMP14618 531 aaKnown RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 MAP2K3P46734 347 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 RAB14P61106 215 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 RPS14P62263 151 aaKnown RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CDH18Q13634 790 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF79Q15937 498 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 DGKKQ5KSL6 1271 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 LRRC66Q68CR7 880 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 FAM122CQ6P4D5 195 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CREB3L2Q70SY1 520 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF367Q7RTV3 350 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 RNF130Q86XS8 419 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SDR16C5Q8N3Y7 309 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SLC5A8Q8N695 610 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 NLGN4YQ8NFZ3 816 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 OR10G2Q8NGC3 310 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 TTC9Q92623 222 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 AKAP1Q92667 903 aaKnown RBP eCLIP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SENP8Q96LD8 212 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GMLQ99445 158 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 C3orf14Q9HBI5 128 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM30AQ9NV96 361 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GPRC5BQ9NZH0 403 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 MROH6A6NGR9 719 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 WASHC1A8K0Z3 465 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CLIC1O00299 241 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SHOXO15266 292 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SUV39H1O43463 412 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CYP17A1P05093 508 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CSF3P09919 207 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 PRKAR1AP10644 381 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SLC2A2P11168 524 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ENGP17813 658 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GGT2P36268 569 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 MAN2A2P49641 1150 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 DBPQ10586 325 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 XKRXQ6PP77 449 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SUSD1Q6UWL2 747 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GLT6D1Q7Z4J2 308 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 RGL4Q8IZJ4 473 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 RTL3Q8N8U3 475 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms