RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TET1Q8NFU7 2136 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 ABLIM3O94929 683 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 COX7A2P14406 83 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 TCTN1Q2MV58 587 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 TPRG1Q6ZUI0 275 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 PAGE2Q7Z2X7 111 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 FCGR1BQ92637 280 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 ZHX1-C8orf76Q96EF9 292 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 P2RY13Q9BPV8 354 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 TMEM165Q9HC07 324 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 SCHIP1Q9P0W5 487 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-202ENST00000352393 PCDHGA6Q9Y5G7 932 aa23.73■■□□□ 1.39
CPNE1-202ENST00000352393 KRT87PA6NCN2 255 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 YY2O15391 372 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 HOXA2O43364 376 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 PPP5CP53041 499 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 CSNK2BP67870 215 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 CHIT1Q13231 466 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 DGKKQ5KSL6 1271 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 ZNF461Q8TAF7 563 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 SKA2Q8WVK7 121 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-202ENST00000352393 SPATA9Q9BWV2 254 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 PCDHB11Q9Y5F2 797 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 GFYI3L273 518 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 SLC16A5O15375 505 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 CPSF4O95639 269 aaKnown RBP23.72■■□□□ 1.39
CPNE1-202ENST00000352393 TMED10P49755 219 aaKnown RBP23.72■■□□□ 1.39
CPNE1-202ENST00000352393 KCNJ10P78508 379 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 FPGSQ05932 587 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 RFLNAQ6ZTI6 216 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 DSG4Q86SJ6 1040 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 MCFD2Q8NI22 146 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 DCSTAMPQ9H295 470 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 RNF6Q9Y252 685 aa23.72■■□□□ 1.39
CPNE1-202ENST00000352393 CD22P20273 847 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 FUT4P22083 530 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 LHCGRP22888 699 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 UGT2B10P36537 528 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 LIPAP38571 399 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 PFN3P60673 137 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 ZNF33BQ06732 778 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 SLC22A16Q86VW1 577 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 OR2AP1Q8NGE2 309 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 SCRN2Q96FV2 425 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 HERC2P3Q9BVR0 1158 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 TPT1P8Q9HAU6 139 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 PABPN1LA6NDY0 278 aaKnown RBP23.71■■□□□ 1.39
CPNE1-202ENST00000352393 KDM1AO60341 852 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 LAMP1P11279 417 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 CYP2A7P20853 494 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 AP1S2P56377 157 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 PTSQ03393 145 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 SREBF2Q12772 1141 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 TBCEQ15813 527 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-202ENST00000352393 FAM124AQ86V42 546 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 LACC1Q8IV20 430 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 ASIC4Q96FT7 647 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 TPD52L3Q96J77 140 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 HEPHQ9BQS7 1158 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 TMPRSS11EQ9UL52 423 aa23.71■■□□□ 1.39
CPNE1-202ENST00000352393 PNMA8BQ9ULN7 279 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-202ENST00000352393 A0A1W2PQ45 241 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-202ENST00000352393 A0A1W2PQY0 241 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 ZBBXA8MT70 800 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 UPK3BL1B0FP48 263 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 TMEM229AB2RXF0 380 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 UPK3BL2E5RIL1 263 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 NUDT7P0C024 238 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 TUBA1BP68363 451 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 LMAN2Q12907 356 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 VEPH1Q14D04 833 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 PRSS36Q5K4E3 855 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 TUBA1AQ71U36 451 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 WDR20Q8TBZ3 569 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 ECHDC3Q96DC8 303 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 DACH2Q96NX9 599 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 COPS4Q9BT78 406 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 ABCB8Q9NUT2 735 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 SPATA6Q9NWH7 488 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-202ENST00000352393 CLEC4EQ9ULY5 219 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 BTBD3Q9Y2F9 522 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 AP1M2Q9Y6Q5 423 aa23.7■■□□□ 1.38
CPNE1-202ENST00000352393 C1orf226A1L170 272 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 METTL15A6NJ78 407 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 UGDHO60701 494 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 PXNP49023 591 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 ALDH7A1P49419 539 aaKnown RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 MAPK11Q15759 364 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 PLEKHS1Q5SXH7 462 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 LIPJQ5W064 366 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 USP45Q70EL2 814 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 METTL3Q86U44 580 aaKnown RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 SH3KBP1Q96B97 665 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 C11orf24Q96F05 449 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 MCCC1Q96RQ3 725 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 ATG10Q9H0Y0 220 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 ZBTB20Q9HC78 741 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-202ENST00000352393 POLE4Q9NR33 117 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 PLCXD1Q9NUJ7 323 aa23.69■■□□□ 1.38
CPNE1-202ENST00000352393 VPS29Q9UBQ0 182 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms