RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MYO10Q9HD67 2058 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PRAMEF33A0A0G2JMD5 474 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 FEZF1A0PJY2 475 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 ALBP02768 609 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CBSLP0DN79 551 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 TCF3P15923 654 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 ENGP17813 658 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PSMA3P25788 255 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CBSP35520 551 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 POLR2IP36954 125 aaKnown RBP13.43□□□□□ -0.26
TRIM4-201ENST00000349062 HNRNPA1L2Q32P51 320 aaKnown RBP13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PLEKHS1Q5SXH7 462 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 LRRC70Q7Z2Q7 622 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 SNX29P2Q8IUI4 249 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 MSRB3Q8IXL7 192 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 TMEM132CQ8N3T6 1108 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 HDDC3Q8N4P3 179 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 ABHD8Q96I13 439 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 PLEKHA8Q96JA3 519 aa13.43□□□□□ -0.26
TRIM4-201ENST00000349062 CD9P21926 228 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 CRATP43155 626 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 EEFSECP57772 596 aaKnown RBP13.42□□□□□ -0.26
TRIM4-201ENST00000349062 CTBSQ01459 385 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 NCCRP1Q6ZVX7 275 aaPredicted RBP13.42□□□□□ -0.26
TRIM4-201ENST00000349062 DPPA4Q7L190 304 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 HMGN2P46Q86SG4 172 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 CROCCP3Q8IVE0 287 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 TERB1Q8NA31 727 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 OR14C36Q8NHC7 312 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 DTD2Q96FN9 168 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 SLC23A2Q9UGH3 650 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 MAFFQ9ULX9 164 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 CA5BQ9Y2D0 317 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 KLHL20Q9Y2M5 609 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 DYRK1BQ9Y463 629 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 PLEKHM1Q9Y4G2 1056 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 SCN8AQ9UQD0 1980 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 GBF1Q92538 1859 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 AGAP14A8MT82 685 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 PDZK1P1A8MUH7 402 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 PTGES3LE9PB15 166 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 TOR1BO14657 336 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 COQ9O75208 318 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 KAT7O95251 611 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 IL6P05231 212 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 HNRNPA1P09651 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRIM4-201ENST00000349062 JAK1P23458 1154 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 ELK4P28324 431 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 RPS9P46781 194 aaKnown RBP13.42□□□□□ -0.26
TRIM4-201ENST00000349062 PPM1FP49593 454 aaPredicted RBP13.42□□□□□ -0.26
TRIM4-201ENST00000349062 EPHA5P54756 1037 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 DMC1Q14565 340 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 GALNT18Q6P9A2 607 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 KCTD8Q6ZWB6 473 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 OR7G3Q8NG95 312 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 OTUB1Q96FW1 271 aaPredicted RBP13.42□□□□□ -0.26
TRIM4-201ENST00000349062 C9orf16Q9BUW7 83 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 AGPAT4Q9NRZ5 378 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 OBSL1O75147 1896 aa13.42□□□□□ -0.26
TRIM4-201ENST00000349062 FGF19O95750 216 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CLCNKAP51800 687 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 MERTKQ12866 999 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 TTC23LQ6PF05 361 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 TECPR1Q7Z6L1 1165 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ZC3H7AQ8IWR0 971 aaKnown RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CENPSQ8N2Z9 138 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ZUFSPQ96AP4 578 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF597Q96LX8 424 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 BDH2Q9BUT1 245 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 RMND5AQ9H871 391 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 RDH14Q9HBH5 336 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 TAC3Q9UHF0 121 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF451Q9Y4E5 1061 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 H0Y858 1186 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 KLK1P06870 262 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CDH1P12830 882 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 GJA4P35212 333 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 P2RY2P41231 377 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 RELAQ04206 551 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ELAVL3Q14576 367 aaKnown RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 SLC28A3Q9HAS3 691 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 THG1LQ9NWX6 298 aaKnown RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 MAGEL2Q9UJ55 1249 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 EPOPA6NHQ4 379 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 GFYI3L273 518 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CLIC1O00299 241 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 KPNA5O15131 536 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 AMD1P17707 334 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 HNMTP50135 292 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CAMK2GQ13555 558 aaPredicted RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 SIM2Q14190 667 aaPredicted RBP13.41□□□□□ -0.26
TRIM4-201ENST00000349062 KIAA0040Q15053 153 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 CYP2A13Q16696 494 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 TRIM16LQ309B1 348 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 ZDHHC20Q5W0Z9 365 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 PARM1Q6UWI2 310 aa13.41□□□□□ -0.26
TRIM4-201ENST00000349062 VITQ6UXI7 678 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms