RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 NDNFQ8TB73 568 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 SLC12A9Q9BXP2 914 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 C3orf18Q9UK00 162 aa20.62■□□□□ 0.89
PTPN18-202ENST00000347849 FAM32AQ9Y421 112 aaKnown RBP20.62■□□□□ 0.89
PTPN18-202ENST00000347849 TSPAN6O43657 245 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 KDM1AO60341 852 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 ANXA5P08758 320 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 MSH3P20585 1137 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 PGS1Q32NB8 556 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 ADPRMQ3LIE5 342 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 DNAJC14Q6Y2X3 702 aaPredicted RBP20.61■□□□□ 0.89
PTPN18-202ENST00000347849 SVOPLQ8N434 492 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 WFIKKN2Q8TEU8 576 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 BTN2A2Q8WVV5 523 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 FAR1Q8WVX9 515 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 HPS1Q92902 700 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 GLMNQ92990 594 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 AP2M1Q96CW1 435 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 PARVBQ9HBI1 364 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 TMEM45AQ9NWC5 275 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 AASSQ9UDR5 926 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 HCN2Q9UL51 889 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 MYO9BQ13459 2157 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 PRAMEF4O60810 478 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 NADKO95544 446 aaPredicted RBP20.61■□□□□ 0.89
PTPN18-202ENST00000347849 SLC2A4P14672 509 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 EPB42P16452 691 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 PREPP48147 710 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 IL5RAQ01344 420 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 PTGR1Q14914 329 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 INAQ16352 499 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 PRAMEF9Q5VWM5 478 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 TMEM53Q6P2H8 277 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 NEK5Q6P3R8 708 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF548Q8NEK5 533 aaPredicted RBP20.61■□□□□ 0.89
PTPN18-202ENST00000347849 USE1Q9NZ43 259 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 KLHL42Q9P2K6 505 aa20.61■□□□□ 0.89
PTPN18-202ENST00000347849 NUP210Q8TEM1 1887 aaPredicted RBP20.6■□□□□ 0.89
PTPN18-202ENST00000347849 LINC01565O15544 149 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 GGT5P36269 586 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 DCTP40126 519 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 VBP1P61758 197 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 CYP4F3Q08477 520 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 CDK5R2Q13319 367 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF234Q14588 700 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 CPSF6Q16630 551 aaKnown RBP eCLIP20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF691Q5VV52 312 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 EID3Q8N140 333 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 OR10Q1Q8NGQ4 319 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 VMP1Q96GC9 406 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 LRIG1Q96JA1 1093 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 CCDC115Q96NT0 180 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 FAM129BQ96TA1 746 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ZSCAN5AQ9BUG6 496 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ATG10Q9H0Y0 220 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 SFXN1Q9H9B4 322 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 INVSQ9Y283 1065 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 GPC6Q9Y625 555 aaPredicted RBP20.6■□□□□ 0.89
PTPN18-202ENST00000347849 PLXNA2O75051 1894 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ELOVL7A1L3X0 281 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 CXCR6O00574 342 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 NFATC1O95644 943 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 SOD1P00441 154 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 FTH1P02794 183 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 MAP2K4P45985 399 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 VASPP50552 380 aaPredicted RBP20.6■□□□□ 0.89
PTPN18-202ENST00000347849 HNRNPA1L2Q32P51 320 aaKnown RBP20.6■□□□□ 0.89
PTPN18-202ENST00000347849 PTCHD3Q3KNS1 767 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 CCSMST1Q4G0I0 132 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 C1QTNF12Q5T7M4 302 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 DCP2Q8IU60 420 aaKnown RBP20.6■□□□□ 0.89
PTPN18-202ENST00000347849 SLC13A3Q8WWT9 602 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 S100ZQ8WXG8 99 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 GLYATL1Q969I3 302 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ALOXE3Q9BYJ1 711 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 PLA2G2FQ9BZM2 168 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 ERVK-18Q9QC07 812 aa20.6■□□□□ 0.89
PTPN18-202ENST00000347849 GFYI3L273 518 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 ABRQ12979 859 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 KIAA0040Q15053 153 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 MAPKAPK3Q16644 382 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF284Q2VY69 593 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 FAM174BQ3ZCQ3 159 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 VITQ6UXI7 678 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 ADHFE1Q8IWW8 467 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 PHACTR4Q8IZ21 702 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 MCOLN3Q8TDD5 553 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 RORBQ92753 470 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 GTF2H4Q92759 462 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 NCLNQ969V3 563 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 CHFRQ96EP1 664 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 SAMD11Q96NU1 681 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 NTMT1Q9BV86 223 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 NKX2-4Q9H2Z4 354 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 ZNF490Q9ULM2 529 aaPredicted RBP20.59■□□□□ 0.89
PTPN18-202ENST00000347849 DNAJB5O75953 348 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 ITPKAP23677 461 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 NEK2P51955 445 aa20.59■□□□□ 0.89
PTPN18-202ENST00000347849 RPL38P63173 70 aaKnown RBP20.59■□□□□ 0.89
PTPN18-202ENST00000347849 RAPSNQ13702 412 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms