RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 RBM48Q5RL73 367 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 KLHDC8AQ8IYD2 350 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 SPARTQ8N0X7 666 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ARL10Q8N8L6 244 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF555Q8NEP9 628 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF480Q8WV37 535 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 NXPE3Q969Y0 559 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 RSPRY1Q96DX4 576 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 IL1RAPQ9NPH3 570 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 FAM120CQ9NX05 1096 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 EXO1Q9UQ84 846 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 XIRP2A4UGR9 3374 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 hCG_2039718K7EN88 272 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 SCAMP2O15127 329 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 LILRB5O75023 590 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ABCB7O75027 752 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 EPN2O95208 641 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 JUNBP17275 347 aaPredicted RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 KDELR2P33947 212 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 BMPR1AP36894 532 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 C21orf58P58505 322 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF33BQ06732 778 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 PCDH1Q08174 1060 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 HKDC1Q2TB90 917 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 CATSPEREQ5SY80 951 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 BROXQ5VW32 411 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 SHQ1Q6PI26 577 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ARHGAP22Q7Z5H3 698 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 GALNT5Q7Z7M9 940 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 GPR156Q8NFN8 814 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 ATL1Q8WXF7 558 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 SNX19Q92543 992 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 DTNBP1Q96EV8 351 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 COQ10AQ96MF6 247 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 DUSP26Q9BV47 211 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 LHPPQ9H008 270 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 RAD18Q9NS91 495 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 PAK1IP1Q9NWT1 392 aaPredicted RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 C3orf18Q9UK00 162 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 SAMD4AQ9UPU9 718 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 QSOX1O00391 747 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 SEC14L2O76054 403 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 C1orf105O95561 183 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 ANXA4P09525 319 aaPredicted RBP14.9□□□□□ -0.02
UPF3B-202ENST00000345865 DAPP51397 102 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 RPS13P62277 151 aaKnown RBP14.9□□□□□ -0.02
UPF3B-202ENST00000345865 GRSF1Q12849 480 aaKnown RBP eCLIP14.9□□□□□ -0.02
UPF3B-202ENST00000345865 EPS8Q12929 822 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF691Q5VV52 312 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 SLCO4C1Q6ZQN7 724 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 HIPK1Q86Z02 1210 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 PGBD3Q8N328 593 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 ST13P5Q8NFI4 369 aaPredicted RBP14.9□□□□□ -0.02
UPF3B-202ENST00000345865 CHTF18Q8WVB6 975 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 OTUB2Q96DC9 234 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 DTD2Q96FN9 168 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 TUBA1CQ9BQE3 449 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 TPT1P8Q9HAU6 139 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 BRF2Q9HAW0 419 aa14.9□□□□□ -0.02
UPF3B-202ENST00000345865 C1orf226A1L170 272 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 PRRT4C9JH25 899 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 HLA-EP13747 358 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 TPD52P55327 224 aaPredicted RBP14.89□□□□□ -0.03
UPF3B-202ENST00000345865 NUP107P57740 925 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 GAB1Q13480 694 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 DCTN2Q13561 401 aaKnown RBP14.89□□□□□ -0.03
UPF3B-202ENST00000345865 RAPSNQ13702 412 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 GTF2H3Q13889 308 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 E2F2Q14209 437 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 SKIV2LQ15477 1246 aaKnown RBP14.89□□□□□ -0.03
UPF3B-202ENST00000345865 GTF2IRD2BQ6EKJ0 949 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 TMPRSS11BQ86T26 416 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 GTF2IRD2Q86UP8 949 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 SFTPA1Q8IWL2 248 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 CFAP206Q8IYR0 622 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 LRIG1Q96JA1 1093 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 CHST8Q9H2A9 424 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 AASSQ9UDR5 926 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 VPS4AQ9UN37 437 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 PCDHB11Q9Y5F2 797 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 H3BM21 787 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 SLC16A6O15403 523 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 SRPRAP08240 638 aaKnown RBP14.89□□□□□ -0.03
UPF3B-202ENST00000345865 PCSK2P16519 638 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 NPPBP16860 134 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 IDSP22304 550 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 GJA8P48165 433 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 ENTPD1P49961 510 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 TBPL1P62380 186 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF385BQ569K4 471 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 OR2T5Q6IEZ7 315 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 ERAP2Q6P179 960 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 SYNPOQ8N3V7 929 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 OR2T29Q8NH02 315 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 CNIH3Q8TBE1 160 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 TANKQ92844 425 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 MAL2Q969L2 176 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 CSF3RQ99062 836 aa14.89□□□□□ -0.03
UPF3B-202ENST00000345865 OR2AG1Q9H205 316 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms