RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 LIPIQ6XZB0 460 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 OR7G3Q8NG95 312 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 HUS1BQ8NHY5 278 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 FAM81AQ8TBF8 368 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 RNF217Q8TC41 542 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 ING5Q8WYH8 240 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 MAL2Q969L2 176 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 NEIL2Q969S2 332 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 AP2M1Q96CW1 435 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 CNDP2Q96KP4 475 aaKnown RBP20.67■□□□□ 0.9
CCDC38-201ENST00000344280 CCDC138Q96M89 665 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 GALNT8Q9NY28 637 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 FAF1Q9UNN5 650 aaPredicted RBP20.67■□□□□ 0.9
CCDC38-201ENST00000344280 RUVBL1Q9Y265 456 aaKnown RBP20.67■□□□□ 0.9
CCDC38-201ENST00000344280 ATG13O75143 517 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 ELFN1P0C7U0 828 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 NR4A1P22736 598 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 XPAP23025 273 aaPredicted RBP20.67■□□□□ 0.9
CCDC38-201ENST00000344280 MMP12P39900 470 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 CRYBA2P53672 197 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 LAIR1Q6GTX8 287 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 DPPA4Q7L190 304 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 PIK3C3Q8NEB9 887 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 HSH2DQ96JZ2 352 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 LRRC3BQ96PB8 259 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 FAM83CQ9BQN1 747 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 DUSP26Q9BV47 211 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 TPT1P8Q9HAU6 139 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 PRM3Q9NNZ6 103 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 FAM120CQ9NX05 1096 aaKnown RBP20.67■□□□□ 0.9
CCDC38-201ENST00000344280 SH2B3Q9UQQ2 575 aa20.67■□□□□ 0.9
CCDC38-201ENST00000344280 SCAMP2O15127 329 aaKnown RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 CCNA2P20248 432 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 EPHA2P29317 976 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 HNRNPFP52597 415 aaKnown RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 TMBIM6P55061 237 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 CDK5R2Q13319 367 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 PARS2Q7L3T8 475 aaKnown RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 TERB1Q8NA31 727 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 GLMNQ92990 594 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 TIFAQ96CG3 184 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 RIBC2Q9H4K1 309 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 TMEM9Q9P0T7 183 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 KIAA0100Q14667 2235 aaKnown RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 PRMT3O60678 531 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 ANXA4P09525 319 aaPredicted RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 PTPN2P17706 415 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 CLK3P49761 638 aaKnown RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 RAD23AP54725 363 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 IL5RAQ01344 420 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 GAB1Q13480 694 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 LDLRAP1Q5SW96 308 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 ZNF697Q5TEC3 545 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 OR56A3Q8NH54 315 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 MAGEB10Q96LZ2 347 aaPredicted RBP20.66■□□□□ 0.9
CCDC38-201ENST00000344280 CCM2Q9BSQ5 444 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 PCDHB11Q9Y5F2 797 aa20.66■□□□□ 0.9
CCDC38-201ENST00000344280 PCM1Q15154 2024 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 CARNS1A5YM72 827 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 K7ESM1 405 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 XYLBO75191 536 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 INMTO95050 263 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 CATP04040 527 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 GBAP04062 536 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 FABP3P05413 133 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 AQP1P29972 269 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 NNMTP40261 264 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 HNF4AP41235 474 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 CASP9P55211 416 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 TCEAL5Q5H9L2 206 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 CATSPEREQ5SY80 951 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 PDE12Q6L8Q7 609 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 C12orf40Q86WS4 652 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 MRPL43Q8N983 215 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 VN1R2Q8NFZ6 395 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 VPS35Q96QK1 796 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 PLGRKTQ9HBL7 147 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 TM9SF3Q9HD45 589 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 FZD4Q9ULV1 537 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 EXO1Q9UQ84 846 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 ORC6Q9Y5N6 252 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 MAN1A2O60476 641 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 FKBP9O95302 570 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 NTRK1P04629 796 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 ITGAMP11215 1152 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 PCMT1P22061 227 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 FMO3P31513 532 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 RYKP34925 604 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 GABARAPL2P60520 117 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 RPS13P62277 151 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 TSTA3Q13630 321 aaPredicted RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 ARHGAP15Q53QZ3 475 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 ZC3H12BQ5HYM0 836 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 KDM4DQ6B0I6 523 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 TMPRSS11BQ86T26 416 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 PGBD3Q8N328 593 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 FBLIM1Q8WUP2 373 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 ZNF480Q8WV37 535 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 ATL1Q8WXF7 558 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 FKBP10Q96AY3 582 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms