RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CLDN8P56748 225 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 FAM189BP81408 668 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 MYBPC1Q00872 1141 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 CLLU1OSQ5K130 101 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 PARGQ86W56 976 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 TRPV1Q8NER1 839 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 CNIH3Q8TBE1 160 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 WFIKKN2Q8TEU8 576 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 TMEM125Q96AQ2 219 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 SLITRK2Q9H156 845 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 IL26Q9NPH9 171 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 POFUT2Q9Y2G5 429 aa6.98□□□□□ -1.29
VCAN-202ENST00000342785 IRGMA1A4Y4 181 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PDYNP01213 254 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ACP5P13686 325 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 TMBIM6P55061 237 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PRMT2P55345 433 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PRR5P85299 388 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 EIF2B5Q13144 721 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 SP140Q13342 867 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 LARS2Q15031 903 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 NCEH1Q6PIU2 408 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 RNF44Q7L0R7 432 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 SMPDL3AQ92484 453 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 KLK6Q92876 244 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ZNF597Q96LX8 424 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PCBD2Q9H0N5 130 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ELAC1Q9H777 363 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 TAC3Q9UHF0 121 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ZNF451Q9Y4E5 1061 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 OARD1Q9Y530 152 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 USP54Q70EL1 1684 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PSIP1O75475 530 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 BPIP17213 487 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ATP13A5Q4VNC0 1218 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CRTC2Q53ET0 693 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 PLEKHS1Q5SXH7 462 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 DDI2Q5TDH0 399 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 C11orf88Q6PI97 169 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 SUSD1Q6UWL2 747 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MMAAQ8IVH4 418 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 REM2Q8IYK8 340 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 LILRA2Q8N149 483 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PPP1R14BQ96C90 147 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 BRINP2Q9C0B6 783 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 TMEM165Q9HC07 324 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 RNF186Q9NXI6 227 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 BACE2Q9Y5Z0 518 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CFAP20Q9Y6A4 193 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 TSPAN6O43657 245 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MT-ND2P03891 347 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 TCF3P15923 654 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 TMEM115Q12893 351 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 DOC2AQ14183 400 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ADGRG2Q8IZP9 1017 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 SLC39A13Q96H72 371 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 VAPAQ9P0L0 249 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 OAS3Q9Y6K5 1087 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 ABHD14A-ACY1A0A1B0GW23 586 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 DRGXA6NNA5 263 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 GPR39O43194 453 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 C6orf47O95873 294 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MYL9P24844 172 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MAT2AP31153 395 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 ADRA1AP35348 466 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ETV3P41162 512 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CLCNKAP51800 687 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MEF2AQ02078 507 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 PCBP2Q15366 365 aaKnown RBP eCLIP6.97□□□□□ -1.299e-7■■■□□ 15.9
VCAN-202ENST00000342785 CXXC5Q7LFL8 322 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 KRT74Q7RTS7 529 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 TSPAN33Q86UF1 283 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 APCDD1Q8J025 514 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 NFKBIDQ8NI38 313 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 TFAP2CQ92754 450 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 NUS1Q96E22 293 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ITPAQ9BY32 194 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ADAP2Q9NPF8 381 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 UBAP1Q9NZ09 502 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 EBF1Q9UH73 591 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MRPS33Q9Y291 106 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 TCRBV3S1A0A5B6 114 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 FBP2O00757 339 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PLOD3O60568 738 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MMP20O60882 483 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 AOC2O75106 756 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 APODP05090 189 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 H1F0P07305 194 aaKnown RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 ARSAP15289 507 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CSNK2A2P19784 350 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 MYF6P23409 242 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ACRV1P26436 265 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 OXTRP30559 389 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 RCAN2Q14206 197 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ZNF404Q494X3 552 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ENPP6Q6UWR7 440 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CEACAM20Q6UY09 585 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 GALNT10Q86SR1 603 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CLIP4Q8N3C7 705 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms