RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TMEM126BQ8IUX1 230 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 OR7A2PQ8NGA2 310 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 DNAJB8Q8NHS0 232 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 SH3KBP1Q96B97 665 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 BMFQ96LC9 184 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 OR2M4Q96R27 311 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 INPP5KQ9BT40 448 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 PELI2Q9HAT8 420 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 EBF1Q9UH73 591 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 A0A096LPI6 279 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 PDZK1P1A8MUH7 402 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 ERN1O75460 977 aaKnown RBP19.24■□□□□ 0.67
RTN1-202ENST00000342503 TGFB1P01137 390 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 ANXA4P09525 319 aaPredicted RBP19.24■□□□□ 0.67
RTN1-202ENST00000342503 PSMB5P28074 263 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 TIA1P31483 386 aaKnown RBP eCLIP19.24■□□□□ 0.67
RTN1-202ENST00000342503 CYP4F3Q08477 520 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 MTAPQ13126 283 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 NFATC4Q14934 902 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 SKIV2LQ15477 1246 aaKnown RBP19.24■□□□□ 0.67
RTN1-202ENST00000342503 FXNQ16595 210 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 GRAMD1BQ3KR37 738 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 TPRG1LQ5T0D9 272 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 LRIF1Q5T3J3 769 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 MSANTD1Q6ZTZ1 278 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 GPR180Q86V85 440 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 KRT78Q8N1N4 520 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 RAB42Q8N4Z0 105 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 CANT1Q8WVQ1 401 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 LRTOMTQ8WZ04 291 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 OR1E3Q8WZA6 343 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 IKZF5Q9H5V7 419 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 PRDM8Q9NQV8 689 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 SLC2A4RGQ9NR83 387 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 SLC6A13Q9NSD5 602 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 CUEDC1Q9NWM3 386 aaPredicted RBP19.24■□□□□ 0.67
RTN1-202ENST00000342503 PCDHB3Q9Y5E6 796 aa19.24■□□□□ 0.67
RTN1-202ENST00000342503 SRFP11831 508 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 HNRNPA2B1P22626 353 aaKnown RBP19.23■□□□□ 0.67
RTN1-202ENST00000342503 HRH2P25021 359 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 PIK3CBP42338 1070 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 KIR3DL1P43629 444 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 C21orf58P58505 322 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 UAP1L1Q3KQV9 507 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 IRAK1BP1Q5VVH5 260 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 TMIGD1Q6UXZ0 262 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 Q6ZS52 159 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 VN1R5Q7Z5H4 357 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 PROSER1Q86XN7 944 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 LINC01555Q8NAE3 123 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 FAM110BQ8TC76 370 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 PDXPQ96GD0 296 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 WDR92Q96MX6 357 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 ZNF583Q96ND8 569 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 THUMPD3Q9BV44 507 aaKnown RBP19.23■□□□□ 0.67
RTN1-202ENST00000342503 PCBD2Q9H0N5 130 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 OR51B5Q9H339 312 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 XKR8Q9H6D3 395 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 TSC22D4Q9Y3Q8 395 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 DTNAQ9Y4J8 743 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 PCDHB14Q9Y5E9 798 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 EYSQ5T1H1 3165 aa19.23■□□□□ 0.67
RTN1-202ENST00000342503 TCRBV5S2A0A599 114 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 OR52A4PA6NMU1 304 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 SAP18O00422 153 aaKnown RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 PCDH7O60245 1069 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 COX7A2P14406 83 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 HOXB9P17482 250 aaPredicted RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 CDKN2CP42773 168 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 ASMTP46597 345 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 AQP4P55087 323 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 PHEXP78562 749 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 SRSF11Q05519 484 aaKnown RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 KRT33BQ14525 404 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 RBBP5Q15291 538 aaKnown RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 RPE65Q16518 533 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 DPY19L1Q2PZI1 675 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 HKDC1Q2TB90 917 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 AASDHQ4L235 1098 aaPredicted RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 PGBD3Q8N328 593 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 GOLM1Q8NBJ4 401 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 NELL1Q92832 810 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 EFHD1Q9BUP0 239 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 REXO4Q9GZR2 422 aaKnown RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 WASH6PQ9NQA3 447 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 CCM2LQ9NUG4 571 aaPredicted RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 ARMC1Q9NVT9 282 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 SIRT5Q9NXA8 310 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 SCHIP1Q9P0W5 487 aaPredicted RBP19.22■□□□□ 0.67
RTN1-202ENST00000342503 LRCH1Q9Y2L9 728 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 DHRS12A0PJE2 317 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 APBB3O95704 486 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 GSNP06396 782 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 PKLRP30613 574 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 WNT3P56703 355 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 CTBSQ01459 385 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 TDGQ13569 410 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 GLYATQ6IB77 296 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 ANKRD26P1Q6NSI1 321 aa19.22■□□□□ 0.67
RTN1-202ENST00000342503 GALNT18Q6P9A2 607 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms