RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ATP6V1B1P15313 513 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 PAX7P23759 505 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 HNF4AP41235 474 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 CCT8P50990 548 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 RAB30Q15771 203 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 TTC23LQ6PF05 361 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 ADAMTSL4Q6UY14 1074 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 OR8J3Q8NGG0 315 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 RAB7BQ96AH8 199 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 LINC00615Q96LM1 132 aaPredicted RBP14.89□□□□□ -0.03
MBD1-203ENST00000339998 YIPF3Q9GZM5 350 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 LTB4R2Q9NPC1 389 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 CCDC177Q9NQR7 707 aaPredicted RBP14.89□□□□□ -0.03
MBD1-203ENST00000339998 IMP3Q9NV31 184 aaKnown RBP14.89□□□□□ -0.03
MBD1-203ENST00000339998 PCDHGA11Q9Y5H2 935 aa14.89□□□□□ -0.03
MBD1-203ENST00000339998 A0A1W2PQF6 199 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 NUDT7P0C024 238 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 CHN2P52757 468 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 RBBP5Q15291 538 aaKnown RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 ZNF385BQ569K4 471 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 SLC5A11Q8WWX8 675 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 C11orf24Q96F05 449 aaPredicted RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 GBP5Q96PP8 586 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 MACROD1Q9BQ69 325 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 CPPED1Q9BRF8 314 aaPredicted RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 SGPP1Q9BX95 441 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 DYRK1BQ9Y463 629 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 A0A0G2JN53 185 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ELOVL7A1L3X0 281 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 POM121BA6NF01 834 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 FPGTO14772 594 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ACOX3O15254 700 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 HNRNPRO43390 633 aaKnown RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 DENRO43583 198 aaKnown RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 PRKD3O94806 890 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 NPPAP01160 153 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ANXA6P08133 673 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 C1GALT1C1LP0DN25 315 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 BMP2P12643 396 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 PRPH2P23942 346 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 CTHP32929 405 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ENPP2Q13822 863 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 PRSS53Q2L4Q9 553 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 SMU1Q2TAY7 513 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 PDZD3Q86UT5 571 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 CHCHD4Q8N4Q1 142 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 TP53I13Q8NBR0 393 aaPredicted RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 FAM120BQ96EK7 910 aaKnown RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 ZNF597Q96LX8 424 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 PRPF18Q99633 342 aaKnown RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 KCNH6Q9H252 994 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 TRBV23OR9-2A0A075B6M9 112 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 C17orf113A0A1B0GUU1 675 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 H7BY64 318 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 CXCR6O00574 342 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 HOXB2P14652 356 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ZNF23P17027 643 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 C5AR1P21730 350 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 IRX1P78414 480 aaPredicted RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 CSTF3Q12996 717 aaKnown RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 RD3Q7Z3Z2 195 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 VN1R5Q7Z5H4 357 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ANKFN1Q8N957 763 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 MAGEE2Q8TD90 523 aaPredicted RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 CSGALNACT1Q8TDX6 532 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 FAM162AQ96A26 154 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 ZNF514Q96K75 400 aaPredicted RBP14.88□□□□□ -0.03
MBD1-203ENST00000339998 PRAP1Q96NZ9 151 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 VCXQ9H320 206 aa14.88□□□□□ -0.03
MBD1-203ENST00000339998 PPM1DO15297 605 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 UGDHO60701 494 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 SEC24DO94855 1032 aaPredicted RBP14.87□□□□□ -0.03
MBD1-203ENST00000339998 SGCGQ13326 291 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 MLF2Q15773 248 aaPredicted RBP14.87□□□□□ -0.03
MBD1-203ENST00000339998 ZIK1Q3SY52 487 aaPredicted RBP14.87□□□□□ -0.03
MBD1-203ENST00000339998 PRAMEF14Q5SWL7 426 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 PRAMEF13Q5VWM6 474 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 METRNLQ641Q3 311 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 COMMD6Q7Z4G1 85 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 MARVELD2Q8N4S9 558 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 LINC01555Q8NAE3 123 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 CATSPER1Q8NEC5 780 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 CIDECQ96AQ7 238 aaPredicted RBP14.87□□□□□ -0.03
MBD1-203ENST00000339998 ITCHQ96J02 903 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 C12orf66Q96MD2 445 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 INSM2Q96T92 566 aaPredicted RBP14.87□□□□□ -0.03
MBD1-203ENST00000339998 DPEP2Q9H4A9 486 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 NTN4Q9HB63 628 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 RAB26Q9ULW5 256 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 GPSM3Q9Y4H4 160 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 ARHGEF17Q96PE2 2063 aaPredicted RBP14.87□□□□□ -0.03
MBD1-203ENST00000339998 PCDH7O60245 1069 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 KLHL18O94889 574 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 OR6B1O95007 311 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 GPIP06744 558 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 KLK1P06870 262 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 ASGR2P07307 311 aa14.87□□□□□ -0.03
MBD1-203ENST00000339998 HOXB3P14651 431 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms