RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 DPH7Q9BTV6 452 aa14.12□□□□□ -0.15
CBX3-201ENST00000337620 DMRT3Q9NQL9 472 aa14.12□□□□□ -0.15
CBX3-201ENST00000337620 UCKL1Q9NWZ5 548 aa14.12□□□□□ -0.15
CBX3-201ENST00000337620 BAIAP2L1Q9UHR4 511 aa14.12□□□□□ -0.15
CBX3-201ENST00000337620 FBXO4Q9UKT5 387 aa14.12□□□□□ -0.15
CBX3-201ENST00000337620 KLHL20Q9Y2M5 609 aa14.12□□□□□ -0.15
CBX3-201ENST00000337620 CFAP73A6NFT4 308 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 ANKDD1BA6NHY2 528 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 LMO7DNF2Z398 122 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 H0YHG0 523 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 FOXE1O00358 373 aaPredicted RBP14.11□□□□□ -0.15
CBX3-201ENST00000337620 OR1F1O43749 312 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PIAS2O75928 621 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 CCNDBP1O95273 360 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 BCKDHAP12694 445 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 NUDT2P50583 147 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PHEXP78562 749 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 REEP5Q00765 189 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 STX5Q13190 355 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PTGR1Q14914 329 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 KIAA1614Q5VZ46 1190 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 TMEM26Q6ZUK4 368 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PIGKQ92643 395 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 SLC25A23Q9BV35 468 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 CADM1Q9BY67 442 aaKnown RBP14.11□□□□□ -0.15
CBX3-201ENST00000337620 MRPL1Q9BYD6 325 aaKnown RBP14.11□□□□□ -0.15
CBX3-201ENST00000337620 EFCAB1Q9HAE3 211 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 SLC6A20Q9NP91 592 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 ZIM2Q9NZV7 527 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 DLGAP4Q9Y2H0 992 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 TMED5Q9Y3A6 229 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 NPIPB8E9PQR5 432 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 SAP18O00422 153 aaKnown RBP14.11□□□□□ -0.15
CBX3-201ENST00000337620 GSC2O15499 205 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 NRP2O60462 931 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PIK3CBP42338 1070 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 MRPL19P49406 292 aaKnown RBP14.11□□□□□ -0.15
CBX3-201ENST00000337620 CYP4F2P78329 520 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 ACSM2AQ08AH3 577 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 BIRC2Q13490 618 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 KIR2DS3Q14952 304 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 VPS26BQ4G0F5 336 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 ACSM2BQ68CK6 577 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 NOXRED1Q6NXP6 359 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.11□□□□□ -0.15
CBX3-201ENST00000337620 ARL14Q8N4G2 192 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 ANKRD53Q8N9V6 530 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 GPR156Q8NFN8 814 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 CLHC1Q8NHS4 586 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PROKR1Q8TCW9 393 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 NELL1Q92832 810 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 MCUR1Q96AQ8 359 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 EBPLQ9BY08 206 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 C1orf21Q9H246 121 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 OR51B5Q9H339 312 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 TMEM184CQ9NVA4 438 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 NMRK1Q9NWW6 199 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 PILRBQ9UKJ0 227 aa14.11□□□□□ -0.15
CBX3-201ENST00000337620 LCMT2O60294 686 aaKnown RBP14.1□□□□□ -0.15
CBX3-201ENST00000337620 KRT16P08779 473 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 MAPK1P28482 360 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 GRK3P35626 688 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 CPOXP36551 454 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 CTSKP43235 329 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 POLR2JP52435 117 aaKnown RBP14.1□□□□□ -0.15
CBX3-201ENST00000337620 KCNK10P57789 538 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 BNIP3Q12983 259 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 ART3Q13508 389 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 VN1R5Q7Z5H4 357 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 PARP9Q8IXQ6 854 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 RBM12BQ8IXT5 1001 aaKnown RBP14.1□□□□□ -0.15
CBX3-201ENST00000337620 C1orf52Q8N6N3 182 aaKnown RBP14.1□□□□□ -0.15
CBX3-201ENST00000337620 KYQ8NBH2 561 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 PITHD1Q9GZP4 211 aaPredicted RBP14.1□□□□□ -0.15
CBX3-201ENST00000337620 ACTL8Q9H568 366 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 ERVMER34-1Q9H9K5 563 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 HRASLS2Q9NWW9 162 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 ASIC5Q9NY37 505 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 ACTR10Q9NZ32 417 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 SUSD2Q9UGT4 822 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 WDFY4Q6ZS81 3184 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 VPS13AQ96RL7 3174 aa14.1□□□□□ -0.15
CBX3-201ENST00000337620 HEATR5BQ9P2D3 2071 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 PPM1DO15297 605 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 UGT2B7P16662 529 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 TYRP1P17643 537 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 ITGAXP20702 1163 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 PTX3P26022 381 aaPredicted RBP14.09□□□□□ -0.15
CBX3-201ENST00000337620 IL12AP29459 219 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 DNAL1Q4LDG9 190 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 BLOC1S3Q6QNY0 202 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 RIPOR1Q6ZS17 1223 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 TRIM73Q86UV7 250 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 SDR16C5Q8N3Y7 309 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 NUDT8Q8WV74 236 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 TSSK3Q96PN8 268 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 RAB3IPQ96QF0 476 aaPredicted RBP14.09□□□□□ -0.15
CBX3-201ENST00000337620 OR2A14Q96R47 310 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 DPY30Q9C005 99 aa14.09□□□□□ -0.15
CBX3-201ENST00000337620 RHBGQ9H310 441 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms