RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 OSTM1Q86WC4 334 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 GLB1L3Q8NCI6 653 aaPredicted RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 IPCEF1Q8WWN9 437 aaPredicted RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CNDP2Q96KP4 475 aaKnown RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 SLC30A3Q99726 388 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 ATP13A2Q9NQ11 1180 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 SLCO3A1Q9UIG8 710 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 RIMKLBQ9ULI2 386 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 STRCP1A6NGW2 1772 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CTDSP2O14595 271 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CASKO14936 926 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 ATG13O75143 517 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PTPN5P54829 565 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 OR4D2P58180 307 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PAFAH1B3Q15102 231 aaKnown RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 TAF1AQ15573 450 aaPredicted RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CFAP77Q6ZQR2 320 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 RNF44Q7L0R7 432 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 AKIP1Q9NQ31 210 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PTGDR2Q9Y5Y4 395 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 TEX51A0A1B0GUA7 166 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 POU2F1P14859 743 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 F8A1P23610 371 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CTNNB1P35222 781 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 GABARAPL2P60520 117 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CTBSQ01459 385 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 RAPSNQ13702 412 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 SLC9A5Q14940 896 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 SPRYD7Q5W111 196 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 ASB18Q6ZVZ8 466 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 KCTD13Q8WZ19 329 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 SLC39A13Q96H72 371 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CHIAQ9BZP6 476 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 NARFLQ9H6Q4 476 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 POLR1DQ9Y2S0 133 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 GRM6O15303 877 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 SELPP16109 830 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 SKP1P63208 163 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 GPLD1P80108 840 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 PRSS55Q6UWB4 352 aaPredicted RBP15.62■□□□□ 0.09
NPHP3-201ENST00000337331 PAMR1Q6UXH9 720 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 WDTC1Q8N5D0 677 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 SLCO4A1Q96BD0 722 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 PYCR2Q96C36 320 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 LRCH3Q96II8 777 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 MTERF1Q99551 399 aaKnown RBP15.62■□□□□ 0.09
NPHP3-201ENST00000337331 FAM234BA2RU67 622 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 OR6A2O95222 327 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 C1QTNF8P60827 252 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 C7orf57Q8NEG2 295 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 NLGN2Q8NFZ4 835 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 TMEM203Q969S6 136 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 TM9SF2Q99805 663 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 MFSD1Q9H3U5 465 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 GKN1Q9NS71 199 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 TLR6Q9Y2C9 796 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 FFAR2O15552 330 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 KIAA0513O60268 411 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 MITFO75030 526 aaPredicted RBP15.62■□□□□ 0.09
NPHP3-201ENST00000337331 TOXO94900 526 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 FHP07954 510 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 SPNP16150 400 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 DGKQP52824 942 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 MLLT10P55197 1068 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 UFM1P61960 85 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 CDK5R2Q13319 367 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 MAMDC4Q6UXC1 1216 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 OR8K3Q8NH51 312 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 ST8SIA2Q92186 375 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 MUL1Q969V5 352 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 GINS4Q9BRT9 223 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 EQTNQ9NQ60 294 aa15.62■□□□□ 0.09
NPHP3-201ENST00000337331 A0A1W2PP18 115 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 GLUD1P00367 558 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 FGBP02675 491 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 IFNW1P05000 195 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 M6PRP20645 277 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 RPL4P36578 427 aaKnown RBP15.61■□□□□ 0.09
NPHP3-201ENST00000337331 NUP62P37198 522 aaPredicted RBP15.61■□□□□ 0.09
NPHP3-201ENST00000337331 CDH12P55289 794 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 GALNT2Q10471 571 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 ZNF613Q6PF04 617 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 FCRL3Q96P31 734 aaPredicted RBP15.61■□□□□ 0.09
NPHP3-201ENST00000337331 SMOQ99835 787 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 NLKQ9UBE8 527 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 CARNS1A5YM72 827 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 EDIL3O43854 480 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 UGT2B17O75795 530 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 CTSEP14091 401 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 PITX1P78337 314 aaPredicted RBP15.61■□□□□ 0.09
NPHP3-201ENST00000337331 LRRC26Q2I0M4 334 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 HSD17B12Q53GQ0 312 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 SLX4IPQ5VYV7 408 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 SH2D5Q6ZV89 423 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 CFAP206Q8IYR0 622 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 POMGNT2Q8NAT1 580 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 OR8D1Q8WZ84 308 aa15.61■□□□□ 0.09
NPHP3-201ENST00000337331 TMEM209Q96SK2 561 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms