RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ST13P5Q8NFI4 369 aaPredicted RBP13.32□□□□□ -0.28
SYNE3-201ENST00000334258 GGHQ92820 318 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 TADA1Q96BN2 335 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 GABARAPL1Q9H0R8 117 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 RAD18Q9NS91 495 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 PSORS1C1Q9UIG5 152 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 KLHL20Q9Y2M5 609 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 CCL27Q9Y4X3 112 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 PCDHGA6Q9Y5G7 932 aa13.32□□□□□ -0.28
SYNE3-201ENST00000334258 NYNRINQ9P2P1 1898 aaKnown RBP13.32□□□□□ -0.28
SYNE3-201ENST00000334258 EFCAB10A6NFE3 127 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 H3BUI4 141 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 SEPT4O43236 478 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 SCO2O43819 266 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 PTHP01270 115 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 C1QCP02747 245 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 RGRP47804 291 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 GPR15P49685 360 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 OR52J3Q8NH60 311 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 SPPL2AQ8TCT8 520 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 TMCO6Q96DC7 493 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 TNKS2Q9H2K2 1166 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 TAS2R16Q9NYV7 291 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 PRG3Q9Y2Y8 225 aaPredicted RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 M0R129 80 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CLIC1O00299 241 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 MANBAO00462 879 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 ESR1P03372 595 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 RGS4P49798 205 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CSTF3Q12996 717 aaKnown RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 FAM214AQ32MH5 1076 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 SBSNQ6UWP8 590 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 AGMOQ6ZNB7 445 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 SELENOMQ8WWX9 145 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 POP5Q969H6 163 aaKnown RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 KATNAL1Q9BW62 490 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 FAM126AQ9BYI3 521 aaPredicted RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 DYRK4Q9NR20 520 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 GLUD1P00367 558 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 C9P02748 559 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CDK1P06493 297 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 EPB42P16452 691 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 ENGP17813 658 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 IL1RNP18510 177 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 TACR1P25103 407 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 RPL9P32969 192 aaKnown RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 DNAJC22Q8N4W6 341 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 UBASH3BQ8TF42 649 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 PRRG3Q9BZD7 231 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 MARCH2Q9P0N8 246 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 CFL2Q9Y281 166 aa13.31□□□□□ -0.28
SYNE3-201ENST00000334258 MN1Q10571 1320 aaPredicted RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 PDCD11Q14690 1871 aaKnown RBP13.31□□□□□ -0.28
SYNE3-201ENST00000334258 TRBV5-3A0A0A0MS03 114 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ALX3O95076 343 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 KRT6AP02538 564 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 KRT6BP04259 564 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ADORA3P0DMS8 318 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 RRM2P31350 389 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 HNF4AP41235 474 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TSTQ16762 297 aaKnown RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 VMACQ2NL98 169 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 CDONQ4KMG0 1287 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 UBE2J2Q8N2K1 259 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 SLC39A13Q96H72 371 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 COL21A1Q96P44 957 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FEVQ99581 238 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 CLPBQ9H078 707 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ELOVL6Q9H5J4 265 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 SERHLQ9NQF3 203 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ELOVL2Q9NXB9 296 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 CRNNQ9UBG3 495 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 RIMKLBQ9ULI2 386 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FNDC1Q4ZHG4 1894 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 UPK3BL1B0FP48 263 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 NT5C1B-RDH14C9J2C7 533 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 UPK3BL2E5RIL1 263 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TNFRSF10BO14763 440 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 SLITRK5O94991 958 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TNFSF8P32971 234 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TIE1P35590 1138 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 PTGER3P43115 390 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 GZMMP51124 257 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ARPP19P56211 112 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 YBEYP58557 167 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 OLR1P78380 273 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TWF1Q12792 350 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 MADCAM1Q13477 382 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FBXO43Q4G163 708 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 C10orf62Q5T681 223 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ZNF551Q7Z340 670 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms