RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 TCFL5Q9UL49 500 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 DMXL2Q8TDJ6 3036 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 AHCTF1Q8WYP5 2266 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 ISM1B1AKI9 464 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 GFYI3L273 518 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 AGRPO00253 132 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 ZNF749O43361 778 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 OR2B3O76000 313 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CCNDBP1O95273 360 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CATP04040 527 aaKnown RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 CYC1P08574 325 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 HRH2P25021 359 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 IVDP26440 423 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CASRP41180 1078 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CSRP3P50461 194 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CLCN7P51798 805 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 EIF3BP55884 814 aaKnown RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 SOX8P57073 446 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CYP4F2P78329 520 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 DMTNQ08495 405 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 SP140Q13342 867 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 THOC5Q13769 683 aaKnown RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 SSPNQ14714 243 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 BRD3Q15059 726 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 NCF4Q15080 339 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 ZIC1Q15915 447 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 LACTB2Q53H82 288 aaPredicted RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 SPANXN3Q5MJ09 141 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 ZNF470Q6ECI4 717 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CASC4Q6P4E1 433 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 RNF44Q7L0R7 432 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 RAB43Q86YS6 212 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 UNC5BQ8IZJ1 945 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 SLC38A9Q8NBW4 561 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 BHLHE22Q8NFJ8 381 aaPredicted RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 OR9A1PQ8NGU1 263 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 MR1Q95460 341 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 CLIP3Q96DZ5 547 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 MS4A14Q96JA4 679 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 PPM1MQ96MI6 270 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 GBP5Q96PP8 586 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 FAM129AQ9BZQ8 928 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 CCDC68Q9H2F9 335 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 XKR8Q9H6D3 395 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 MLXIPLQ9NP71 852 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 SPHK1Q9NYA1 384 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 UTP6Q9NYH9 597 aaKnown RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 EURLQ9NYK6 297 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 ADAM30Q9UKF2 790 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 NXT1Q9UKK6 140 aaKnown RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 FBXO5Q9UKT4 447 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 SLC39A10Q9ULF5 831 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 MAN2B2Q9Y2E5 1009 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 TDRKHQ9Y2W6 561 aaKnown RBP6.07□□□□□ -1.44
SMG1-201ENST00000330588 DHRS7Q9Y394 339 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 COL6A6A6NMZ7 2263 aa6.07□□□□□ -1.44
SMG1-201ENST00000330588 A0A1B0GX78 115 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 A0A1W2PPV9 198 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 OR2A25A4D2G3 310 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 IQCF5A8MTL0 148 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 E5RI56 91 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 TXNDC9O14530 226 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 DSCR3O14972 297 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 SLC16A5O15375 505 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PRPF4O43172 522 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMG1-201ENST00000330588 AVILO75366 819 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 KATNA1O75449 491 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 NTRK1P04629 796 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 C8GP07360 202 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PRKAR1AP10644 381 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PVRP15151 417 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 EZRP15311 586 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 MAGP20916 626 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CMPK1P30085 196 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 SLC1A2P43004 574 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 GIPRP48546 466 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ABATP80404 500 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 DCDP81605 110 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 KLRB1Q12918 225 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 NFATC3Q12968 1075 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 SLBPQ14493 270 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMG1-201ENST00000330588 GRM7Q14831 915 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CRYMQ14894 314 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PPP1R7Q15435 360 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 TRIP13Q15645 432 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 DEFB109BQ30KR1 87 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FAM214AQ32MH5 1076 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 STEAP4Q687X5 459 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PRMT9Q6P2P2 845 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FIGLAQ6QHK4 219 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 LDB1Q86U70 411 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 KCNMB4Q86W47 210 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PDIK1LQ8N165 341 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 KRT222Q8N1A0 295 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 BBOF1Q8ND07 529 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 OR2L3Q8NG85 312 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 OR2A1Q8NGT9 310 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms