RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 RDH12Q96NR8 316 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 GAL3ST4Q96RP7 486 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 REEP4Q9H6H4 257 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 MEAF6Q9HAF1 191 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 EHD3Q9NZN3 535 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 LAMB1P07942 1786 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 TNFRSF21O75509 655 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SIX3O95343 332 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 ANGPTL1O95841 491 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 ITGB7P26010 798 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SPINT3P49223 89 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SLC10A2Q12908 348 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 CCDC80Q76M96 950 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 L3HYPDHQ96EM0 354 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 METTL2AQ96IZ6 378 aaKnown RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 EPB41L1Q9H4G0 881 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 ZDHHC2Q9UIJ5 367 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 OGDHLQ9ULD0 1010 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 IFT52Q9Y366 437 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 IRAK3Q9Y616 596 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SUN3Q8TAQ9 357 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 TMLHEQ9NVH6 421 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 PGRMC2O15173 223 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ITM2AO43736 263 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 RCBTB2O95199 551 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ENGP17813 658 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 PSMA1P25786 263 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 AQP1P29972 269 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 TGFBR2P37173 567 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 CCT3P49368 545 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 MVKQ03426 396 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 LRP8Q14114 963 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 RBM48Q5RL73 367 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 KIAA0319Q5VV43 1072 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 RBM44Q6ZP01 1051 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 PIM3Q86V86 326 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 LINC01465Q8N7H1 131 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 C17orf62Q9BQA9 187 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 LOC100506127A0A0U1RQW1 187 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 TRMUO75648 421 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 HBQ1P09105 142 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 BTN3A2P78410 334 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF252P-AS1Q0IIN9 211 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 HSF5Q4G112 596 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 LRRTM3Q86VH5 581 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 CBR4Q8N4T8 237 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 EBF4Q9BQW3 602 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 TBL1XR1Q9BZK7 514 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 SMG9Q9H0W8 520 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF358Q9NW07 568 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 PPM1HQ9ULR3 514 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 UBE2QL1A1L167 161 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ELOA3DA6NLF2 546 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 PDCD5O14737 125 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 SLC30A4O14863 429 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 FGF3P11487 239 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 HLA-EP13747 358 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ETV3P41162 512 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 FAM189BP81408 668 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 DAG1Q14118 895 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ELOA3BQ3SY89 546 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 FAM91A1Q658Y4 838 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ASPGQ86U10 573 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 MRPL43Q8N983 215 aaKnown RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ELOA3Q8NG57 546 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 CIB1Q99828 191 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF624Q9P2J8 865 aaPredicted RBP11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ERVK-11Q9UQG0 969 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 ENTPD2Q9Y5L3 495 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 LAMB2P55268 1798 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 A0A096LPI6 279 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 PGRP06401 933 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 SRCP12931 536 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 HOXA9P31269 272 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 SNTA1Q13424 505 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 GK3PQ14409 553 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 FAM180AQ6UWF9 173 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 SLC34A3Q8N130 599 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 DCBLD1Q8N8Z6 715 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 EPHA6Q9UF33 1036 aa11.07□□□□□ -0.64
COL4A5-201ENST00000328300 HYKKA2RU49 373 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ARPC2O15144 300 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 DUX1O43812 170 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 CBFA2T3O75081 653 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 TGFB1P01137 390 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 KLK1P06870 262 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 CREB1P16220 341 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 SDC2P34741 201 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PRRT3Q5FWE3 981 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF765Q7L2R6 523 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 UXS1Q8NBZ7 420 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 CRELD1Q96HD1 420 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 OSBPL7Q9BZF2 842 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.06□□□□□ -0.64
COL4A5-201ENST00000328300 LIPT1Q9Y234 373 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 KCNK6Q9Y257 313 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms