RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 OR4K1Q8NGD4 311 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 TUBGCP3Q96CW5 907 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 EDEM2Q9BV94 578 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.66□□□□□ -0.06
PRPF3-201ENST00000324862 TCF7L2Q9NQB0 619 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 CCL27Q9Y4X3 112 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 H0YIV9 168 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 YKT6O15498 198 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 OR1F1O43749 312 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 UGDHO60701 494 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 TBX6O95947 436 aaPredicted RBP14.66□□□□□ -0.06
PRPF3-201ENST00000324862 CTSBP07858 339 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 CMPK1P30085 196 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 HNF4AP41235 474 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 INHBCP55103 352 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 SNRPNP63162 240 aaKnown RBP14.66□□□□□ -0.06
PRPF3-201ENST00000324862 PCDH1Q08174 1060 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 NR0B2Q15466 257 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 XKR7Q5GH72 579 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 SNAP47Q5SQN1 464 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 MED27Q6P2C8 311 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 MTDHQ86UE4 582 aaKnown RBP14.66□□□□□ -0.06
PRPF3-201ENST00000324862 CACNA2D3Q8IZS8 1091 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 MAELQ96JY0 434 aaKnown RBP14.66□□□□□ -0.06
PRPF3-201ENST00000324862 NUDT22Q9BRQ3 303 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 EFCAB11Q9BUY7 163 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 FAM60AQ9NP50 221 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 POMT2Q9UKY4 750 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 STK38LQ9Y2H1 464 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 ARL2BPQ9Y2Y0 163 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 RALGAPA1Q6GYQ0 2036 aa14.66□□□□□ -0.06
PRPF3-201ENST00000324862 ASCC3Q8N3C0 2202 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 SLCO1B7G3V0H7 640 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 CHEK2O96017 543 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 TGFB1P01137 390 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 TGM1P22735 817 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 CD1CP29017 333 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 BCL6P41182 706 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 RPS13P62277 151 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 IFT88Q13099 833 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 ZNF425Q6IV72 752 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 LARP4Q71RC2 724 aaKnown RBP eCLIP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 EFL1Q7Z2Z2 1120 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 SPRED1Q7Z699 444 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 AFAP1L2Q8N4X5 818 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 SLC22A18Q96BI1 424 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 AHCYL2Q96HN2 611 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 FAR2Q96K12 515 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 C1orf50Q9BV19 199 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 SLC29A3Q9BZD2 475 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 NMUR2Q9GZQ4 415 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 ZMYND15Q9H091 742 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 EHD1Q9H4M9 534 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 UCK1Q9HA47 277 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 ARMCX1Q9P291 453 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 NCDNQ9UBB6 729 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 SNX6Q9UNH7 406 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 EME2A4GXA9 379 aaPredicted RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 FAM221BA6H8Z2 402 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 TRPC5OSA6NMA1 111 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 KRT6AP02538 564 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 LMNAP02545 664 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 KRT6BP04259 564 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 KRT6CP48668 564 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 REEP5Q00765 189 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 UBAP2LQ14157 1087 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 DEFB110Q30KQ9 67 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 PROX2Q3B8N5 592 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 ARMC6Q6NXE6 501 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 FBXO42Q6P3S6 717 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 CATSPER2Q96P56 530 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 CCDC3Q9BQI4 270 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 OR51B5Q9H339 312 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 SYNDIG1Q9H7V2 258 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 DNAAF2Q9NVR5 837 aaKnown RBP14.65□□□□□ -0.06
PRPF3-201ENST00000324862 PCDHGA11Q9Y5H2 935 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 HEATR5BQ9P2D3 2071 aa14.65□□□□□ -0.06
PRPF3-201ENST00000324862 RIF1Q5UIP0 2472 aaKnown RBP14.65□□□□□ -0.07
PRPF3-201ENST00000324862 ZNF292O60281 2723 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 A0A0J9YVX5 310 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 A0A1W2PQM1 296 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 SLC9B1P1A6NJY1 282 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 SERPIND1P05546 499 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 ALDOCP09972 364 aaKnown RBP14.64□□□□□ -0.07
PRPF3-201ENST00000324862 CDH3P22223 829 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 DAB2P98082 770 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 NR6A1Q15406 480 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 RFTN2Q52LD8 501 aaPredicted RBP14.64□□□□□ -0.07
PRPF3-201ENST00000324862 FIGLAQ6QHK4 219 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 PAQR7Q86WK9 346 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 LAS2Q8IYD9 372 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 FAM181AQ8N9Y4 354 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 AVL9Q8NBF6 648 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 RHBDD1Q8TEB9 315 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 NUDT8Q8WV74 236 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 CCT6BQ92526 530 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 APIPQ96GX9 242 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 AIF1LQ9BQI0 150 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 PELI2Q9HAT8 420 aa14.64□□□□□ -0.07
PRPF3-201ENST00000324862 IGHV5-51A0A0C4DH38 117 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms