RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 GORASP2Q9H8Y8 452 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 IL17CQ9P0M4 197 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SPATA2Q9UM82 520 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 HHLA1C9JL84 531 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 AGXTP21549 392 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ACRV1P26436 265 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 GJA5P36382 358 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF140P52738 457 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF697Q5TEC3 545 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 DCP2Q8IU60 420 aaKnown RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 TBC1D14Q9P2M4 693 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 A0A1B0GW55 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 STC2O76061 302 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 CXCL14O95715 111 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4L2P0CJ85 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4L3P0CJ86 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4L4P0CJ87 422 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4L5P0CJ88 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4L6P0CJ89 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4L7P0CJ90 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 NCS1P62166 190 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF45Q02386 682 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 PIWIL3Q7Z3Z3 882 aaKnown RBP14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SLC30A8Q8IWU4 369 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 KLHL6Q8WZ60 621 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 RMI1Q9H9A7 625 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 POLE4Q9NR33 117 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DUX4Q9UBX2 424 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DPP7Q9UHL4 492 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 HCN4Q9Y3Q4 1203 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 COL24A1Q17RW2 1714 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ISPDA4D126 451 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 PLOD3O60568 738 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ST3GAL4Q11206 333 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SHQ1Q6PI26 577 aaKnown RBP14.29□□□□□ -0.12
TCOF1-201ENST00000323668 GDPD4Q6W3E5 623 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF730Q6ZMV8 503 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 LRRC17Q8N6Y2 441 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SLC43A3Q8NBI5 491 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 MDGA1Q8NFP4 955 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 BOCQ9BWV1 1114 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ABCD2Q9UBJ2 740 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DSTNP60981 165 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 STX4Q12846 297 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SP140Q13342 867 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 NCEH1Q6PIU2 408 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 IGFN1Q86VF2 1251 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ANKRD13BQ86YJ7 626 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 NFKBIDQ8NI38 313 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 OVCA2Q8WZ82 227 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SLC39A13Q96H72 371 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 BCL7BQ9BQE9 202 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 HERC2P3Q9BVR0 1158 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 RIOK2Q9BVS4 552 aaKnown RBP14.29□□□□□ -0.12
TCOF1-201ENST00000323668 MTIF3Q9H2K0 278 aaKnown RBP14.29□□□□□ -0.12
TCOF1-201ENST00000323668 C3orf14Q9HBI5 128 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 DCAF13Q9NV06 445 aaKnown RBP14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SBK3P0C264 359 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 CD72P21854 359 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 HOXC13P31276 330 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 IL18Q14116 193 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ZSWIM7Q19AV6 140 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SMU1Q2TAY7 513 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 CRTC2Q53ET0 693 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-201ENST00000323668 OR8D1Q8WZ84 308 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 CDK5RAP2Q96SN8 1893 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 EHD1Q9H4M9 534 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 SARDHQ9UL12 918 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 MAN2B2Q9Y2E5 1009 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 ARFGEF1Q9Y6D6 1849 aa14.29□□□□□ -0.12
TCOF1-201ENST00000323668 C1QTNF3-AMACRE9PGA6 284 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 LAG3P18627 525 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ITIH1P19827 911 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 MAGEA8P43361 318 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 RAB25P57735 213 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 RPS3AP61247 264 aaKnown RBP14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF630Q2M218 657 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 VTCN1Q7Z7D3 282 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 AQP11Q8NBQ7 271 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 OR4K1Q8NGD4 311 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF675Q8TD23 568 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 TMEM175Q9BSA9 504 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 BRINP2Q9C0B6 783 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ANKRA2Q9H9E1 313 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ITM2CQ9NQX7 267 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 TLR4O00206 839 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 TPST2O60704 377 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 ALPLP05186 524 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 PIK3CBP42338 1070 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 XKP51811 444 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 PPP5CP53041 499 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 PLA2G4EQ3MJ16 856 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 BICRALQ6AI39 1079 aa14.28□□□□□ -0.12
TCOF1-201ENST00000323668 GALNT13Q8IUC8 556 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms