RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 SMCO1Q147U7 214 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 TAF1AQ15573 450 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 RAB43Q86YS6 212 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 RNF175Q8N4F7 328 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 YIPF7Q8N8F6 280 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 DNAJC5Q9H3Z4 198 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 ZC3H13Q5T200 1668 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 PRICKLE3O43900 615 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 ADH5P11766 374 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 CBX5P45973 191 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 MTTPP55157 894 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 ZNF311Q5JNZ3 666 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 C15orf52Q6ZUT6 534 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 RNF130Q86XS8 419 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 OXR1Q8N573 874 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 AQP11Q8NBQ7 271 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 OR6Q1Q8NGQ2 317 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 RBM4BQ9BQ04 359 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 RBM4Q9BWF3 364 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 EIF2B3Q9NR50 452 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 MROH2AA6NES4 1674 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 WNT9AO14904 365 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 EDNRBP24530 442 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 PRKD1Q15139 912 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 KIF18BQ86Y91 864 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 TMEM151AQ8N4L1 468 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 OR5T2Q8NGG2 359 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 OR51L1Q8NGJ5 315 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 ZSWIM3Q96MP5 696 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 TTYH1Q9H313 450 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 MROH1Q8NDA8 1641 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 CCDC163A0A0D9SF12 145 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 SSX5O60225 188 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 IL33O95760 270 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 SMIM11AP58511 58 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 IL10RBQ08334 325 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 ARHGAP40Q5TG30 622 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 ZNF782Q6ZMW2 699 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 PEX5LQ8IYB4 626 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 TGM7Q96PF1 710 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 SORBS1Q9BX66 1292 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 TMEM185BQ9H7F4 350 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 SRA1Q9HD15 236 aaKnown RBP8.59□□□□□ -1.03
SSBP2-201ENST00000320672 HCN3Q9P1Z3 774 aa8.59□□□□□ -1.03
SSBP2-201ENST00000320672 SEC14L5O43304 696 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 MSCO60682 206 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 KLF8O95600 359 aaPredicted RBP8.59□□□□□ -1.04
SSBP2-201ENST00000320672 SNHG28P0DPA3 235 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 CSF2RAP15509 400 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 NDUFA9Q16795 377 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 MS4A13Q5J8X5 152 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 CEACAM20Q6UY09 585 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 PRR22Q8IZ63 422 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 DGCR14Q96DF8 476 aaKnown RBP8.59□□□□□ -1.04
SSBP2-201ENST00000320672 DGAT2Q96PD7 388 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 ZBTB20Q9HC78 741 aaPredicted RBP8.59□□□□□ -1.04
SSBP2-201ENST00000320672 ABCA9Q8IUA7 1624 aa8.59□□□□□ -1.04
SSBP2-201ENST00000320672 CASZ1Q86V15 1759 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 GXYLT2A0PJZ3 443 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 KCNJ13O60928 360 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 MOGSQ13724 837 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 PDCD4Q53EL6 469 aaKnown RBP8.58□□□□□ -1.04
SSBP2-201ENST00000320672 FBXO42Q6P3S6 717 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 LRP10Q7Z4F1 713 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 SLC22A16Q86VW1 577 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 OR51A7Q8NH64 312 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 NPRL2Q8WTW4 380 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 LRRC58Q96CX6 371 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 TBL1XR1Q9BZK7 514 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 TTYH3Q9C0H2 523 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 GDAP2Q9NXN4 497 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 LEFTY2O00292 366 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 RXRGP48443 463 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 PPP3R1P63098 170 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 CYTH4Q9UIA0 394 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 ZNF99A8MXY4 864 aaPredicted RBP8.58□□□□□ -1.04
SSBP2-201ENST00000320672 WASH3PC4AMC7 463 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 SOX1O00570 391 aaPredicted RBP8.58□□□□□ -1.04
SSBP2-201ENST00000320672 DSTNP60981 165 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 GALNT12Q8IXK2 581 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 CCDC54Q8NEL0 328 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 TAMM41Q96BW9 452 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 MAGEH1Q9H213 219 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 FZD8Q9H461 694 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 KCMF1Q9P0J7 381 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 SLCO3A1Q9UIG8 710 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 TLR4O00206 839 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 WFS1O76024 890 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 F10P00742 488 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 ATP1B2P14415 290 aaPredicted RBP8.58□□□□□ -1.04
SSBP2-201ENST00000320672 GALK2Q01415 458 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 ELP6Q0PNE2 266 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 LCN1P1Q5VSP4 162 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 KLHDC10Q6PID8 442 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 TSPAN33Q86UF1 283 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
SSBP2-201ENST00000320672 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■■□□ 15.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms